RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 KHDRBS2Q5VWX1 349 aaKnown RBP17.83■□□□□ 0.45
SMPD1-203ENST00000527275 COMMD6Q7Z4G1 85 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 DTWD1Q8N5C7 304 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 NSMCE2Q96MF7 247 aa17.83■□□□□ 0.45
SMPD1-203ENST00000527275 GABRR3A8MPY1 467 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 SCAMP2O15127 329 aaKnown RBP17.83■□□□□ 0.44
SMPD1-203ENST00000527275 SCN2BO60939 215 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 HOXB9P17482 250 aaPredicted RBP17.83■□□□□ 0.44
SMPD1-203ENST00000527275 TRPC1P48995 793 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 HNRNPFP52597 415 aaKnown RBP17.83■□□□□ 0.44
SMPD1-203ENST00000527275 HYAL2Q12891 473 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 DEPDC1Q5TB30 811 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 ANKRD26P1Q6NSI1 321 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 AMIGO2Q86SJ2 522 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 METTL4Q8N3J2 472 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 TNIP2Q8NFZ5 429 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 MIEF2Q96C03 454 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 AURKBQ96GD4 344 aaPredicted RBP17.83■□□□□ 0.44
SMPD1-203ENST00000527275 KAT8Q9H7Z6 458 aaKnown RBP17.83■□□□□ 0.44
SMPD1-203ENST00000527275 FAM120CQ9NX05 1096 aaKnown RBP17.83■□□□□ 0.44
SMPD1-203ENST00000527275 HCN4Q9Y3Q4 1203 aa17.83■□□□□ 0.44
SMPD1-203ENST00000527275 PTPRZ1P23471 2315 aaPredicted RBP17.83■□□□□ 0.44
SMPD1-203ENST00000527275 H0YGG7 62 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 GMNNO75496 209 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 GP1BAP07359 652 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 LAMP1P11279 417 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 GGT1P19440 569 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 ARF3P61204 181 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-203ENST00000527275 CPTPQ5TA50 214 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 HMBOX1Q6NT76 420 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 ERMP1Q7Z2K6 904 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 ASPGQ86U10 573 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 CARFQ8N187 725 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 WDR48Q8TAF3 677 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 RERGQ96A58 199 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-203ENST00000527275 EME1Q96AY2 570 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 PANX1Q96RD7 426 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 PRPF18Q99633 342 aaKnown RBP17.82■□□□□ 0.44
SMPD1-203ENST00000527275 CPPED1Q9BRF8 314 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-203ENST00000527275 DUSP26Q9BV47 211 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 AICDAQ9GZX7 198 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 KLHL31Q9H511 634 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 PDE7BQ9NP56 450 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 SEMA5BQ9P283 1151 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 WDFY3Q8IZQ1 3526 aa17.82■□□□□ 0.44
SMPD1-203ENST00000527275 GSTA4O15217 222 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 EIF2S1P05198 315 aaKnown RBP17.81■□□□□ 0.44
SMPD1-203ENST00000527275 PIM1P11309 404 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-203ENST00000527275 HPCAL1P37235 193 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 HSD11B2P80365 405 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 ZNF763Q0D2J5 394 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 KCNAB1Q14722 419 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 STPG1Q5TH74 334 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 ASCL5Q7RTU5 278 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 DGLUCYQ7Z3D6 616 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 DNAJC22Q8N4W6 341 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 KCT2Q8NC54 265 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 OR4D9Q8NGE8 314 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 TM4SF19Q96DZ7 209 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 THAP11Q96EK4 314 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 CCDC115Q96NT0 180 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 GFM1Q96RP9 751 aaKnown RBP17.81■□□□□ 0.44
SMPD1-203ENST00000527275 TBCDQ9BTW9 1192 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 ANAPC2Q9UJX6 822 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 ELOVL7A1L3X0 281 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 P2RX6O15547 441 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 FOXD2O60548 495 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-203ENST00000527275 GBAP04062 536 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 CTSBP07858 339 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 SLC35G6P0C7Q6 338 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 UQCRBP14927 111 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 MLLT3P42568 568 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-203ENST00000527275 COL9A2Q14055 689 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-203ENST00000527275 ZC3H12BQ5HYM0 836 aaKnown RBP17.81■□□□□ 0.44
SMPD1-203ENST00000527275 PRSS42Q7Z5A4 293 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 MCATQ8IVS2 390 aaKnown RBP17.81■□□□□ 0.44
SMPD1-203ENST00000527275 PDP2Q9P2J9 529 aa17.81■□□□□ 0.44
SMPD1-203ENST00000527275 RTCAO00442 366 aaKnown RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 NTN3O00634 580 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 PLPP1O14494 284 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 CPSF4O95639 269 aaKnown RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 KLK1P06870 262 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 PLA2G16P53816 162 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 VSX2P58304 361 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 ADPRMQ3LIE5 342 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 MTX3Q5HYI7 312 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 CAMKMTQ7Z624 323 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 RCBTB1Q8NDN9 531 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 FIG4Q92562 907 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 COQ8BQ96D53 544 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 MS4A6EQ96DS6 147 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 SLC41A2Q96JW4 573 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 BTBD9Q96Q07 612 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 SORBS1Q9BX66 1292 aaKnown RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 SLC6A16Q9GZN6 736 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 CHRNA10Q9GZZ6 450 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 GORASP2Q9H8Y8 452 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 CNOT11Q9UKZ1 510 aaKnown RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 IGHV5-10-1A0A0J9YXX1 117 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms