RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 MTHFD2P13995 350 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 AGAP20933 346 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 HIST1H1TP22492 207 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-207ENST00000527189 ATP5A1P25705 553 aaKnown RBP12.49□□□□□ -0.41
CAPN1-207ENST00000527189 CERS1P27544 350 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 PIK3CBP42338 1070 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 MSH2P43246 934 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 SLC7A5Q01650 507 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 NAA30Q147X3 362 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-207ENST00000527189 AP5B1Q2VPB7 878 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 DEPDC1Q5TB30 811 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 MROH9Q5TGP6 573 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 LIPJQ5W064 366 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 XKRXQ6PP77 449 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 SPPL2CQ8IUH8 684 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 SIAH3Q8IW03 269 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 GPALPP1Q8IXQ4 340 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-207ENST00000527189 GHDCQ8N2G8 530 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 ZNF808Q8N4W9 903 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-207ENST00000527189 TMEM156Q8N614 296 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 ACOT4Q8N9L9 421 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 TMEM52Q8NDY8 209 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 MNS1Q8NEH6 495 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 OR7G3Q8NG95 312 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 EXT2Q93063 718 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 LRRC1Q9BTT6 524 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 ALOXE3Q9BYJ1 711 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 MS4A12Q9NXJ0 267 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 MTRF1LQ9UGC7 380 aaKnown RBP12.49□□□□□ -0.41
CAPN1-207ENST00000527189 FBXW2Q9UKT8 454 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 ASB1Q9Y576 335 aa12.49□□□□□ -0.41
CAPN1-207ENST00000527189 TNPO3Q9Y5L0 923 aaKnown RBP12.49□□□□□ -0.41
CAPN1-207ENST00000527189 HMX2A2RU54 273 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 NPIPA5E9PKD4 350 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 TGFBR3LH3BV60 316 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 UBXN8O00124 270 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 HNRNPRO43390 633 aaKnown RBP12.48□□□□□ -0.41
CAPN1-207ENST00000527189 KLK8O60259 260 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 UGDHO60701 494 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 ITGA10O75578 1167 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 KLHL2O95198 593 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 IFNA16P05015 189 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 ZNF24P17028 368 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 HNRNPFP52597 415 aaKnown RBP12.48□□□□□ -0.41
CAPN1-207ENST00000527189 ALDH18A1P54886 795 aaKnown RBP12.48□□□□□ -0.41
CAPN1-207ENST00000527189 STX4Q12846 297 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 BMPR2Q13873 1038 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 SETDB1Q15047 1291 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 WHAMMP3Q1A5X7 153 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 KHDRBS2Q5VWX1 349 aaKnown RBP12.48□□□□□ -0.41
CAPN1-207ENST00000527189 SP5Q6BEB4 398 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-207ENST00000527189 ADNP2Q6IQ32 1131 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 GRHL2Q6ISB3 625 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 KLC3Q6P597 504 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 UBE3DQ7Z6J8 389 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 FAM47BQ8NA70 645 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 MYRIPQ8NFW9 859 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 OR8K3Q8NH51 312 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 OR14A16Q8NHC5 309 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 C16orf52Q8NHV5 167 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 ITLN2Q8WWU7 325 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-207ENST00000527189 NCLNQ969V3 563 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 CCDC120Q96HB5 630 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 MAGED4Q96JG8 741 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 CENPKQ9BS16 269 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 FUT8Q9BYC5 575 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 ACSS3Q9H6R3 686 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 RUBCNLQ9H714 662 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 SNX15Q9NRS6 342 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
CAPN1-207ENST00000527189 ZNF223Q9UK11 482 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-207ENST00000527189 NPIPA1Q9UND3 350 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 ANGPTL3Q9Y5C1 460 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 PCDHGA11Q9Y5H2 935 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 MTORP42345 2549 aa12.48□□□□□ -0.41
CAPN1-207ENST00000527189 A0A096LPK6 155 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 ESYT3A0FGR9 886 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 WISP2O76076 250 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 URI1O94763 535 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-207ENST00000527189 TGFB1P01137 390 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 ESRRAP11474 423 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-207ENST00000527189 PCNAP12004 261 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 PTX3P26022 381 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-207ENST00000527189 TYK2P29597 1187 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 PIK3CGP48736 1102 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 ST13P50502 369 aaKnown RBP12.47□□□□□ -0.41
CAPN1-207ENST00000527189 SSR4P51571 173 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 SRSF11Q05519 484 aaKnown RBP12.47□□□□□ -0.41
CAPN1-207ENST00000527189 PCBP2Q15366 365 aaKnown RBP eCLIP12.47□□□□□ -0.41
CAPN1-207ENST00000527189 OR4C11Q6IEV9 310 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 HSDL2Q6YN16 418 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 ZNF793Q6ZN11 406 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 MRGPRGQ86SM5 289 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 TICAM1Q8IUC6 712 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 SULF2Q8IWU5 870 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 EID3Q8N140 333 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 CYP4Z2PQ8N1L4 340 aa12.47□□□□□ -0.41
CAPN1-207ENST00000527189 MMGT1Q8N4V1 131 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 225.5 ms