RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 MAN1B1Q9UKM7 699 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 WDR37Q9Y2I8 494 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 Q9Y3F1 56 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 POMT1Q9Y6A1 747 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 GRIN2DO15399 1336 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 SCN10AQ9Y5Y9 1956 aa3.42□□□□□ -1.86
CD44-219ENST00000525685 TANC1Q9C0D5 1861 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 PCNTO95613 3336 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 TRAV34A0A0B4J273 112 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 CASTOR2A6NHX0 329 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 MSH4O15457 936 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 PGLSO95336 258 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 TDP2O95551 362 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 LGALS2P05162 132 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 ZNF286BP0CG31 522 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 RNF224P0DH78 156 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 SLC2A2P11168 524 aaPredicted RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 GJB2P29033 226 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 DNA2P51530 1060 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 NR0B1P51843 470 aaKnown RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 GNB1P62873 340 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 SP4Q02446 784 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 SCN1BQ07699 218 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 RASGEF1BQ0VAM2 473 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 SGCGQ13326 291 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 ITGB3BPQ13352 177 aaPredicted RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 TUBB2AQ13885 445 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 TRIM29Q14134 588 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 OPCMLQ14982 345 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 RBBP7Q16576 425 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 PTGISQ16647 500 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 UGCGQ16739 394 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 HSDL1Q3SXM5 330 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 PDLIM3Q53GG5 364 aaPredicted RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 LACTB2Q53H82 288 aaPredicted RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 FGD3Q5JSP0 725 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 C6orf136Q5SQH8 315 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 CELF3Q5SZQ8 465 aaKnown RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 SHEQ5VZ18 495 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 ARHGAP17Q68EM7 881 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 CAVIN1Q6NZI2 390 aaKnown RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 METTL7BQ6UX53 244 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 CXCL17Q6UXB2 119 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 NIPA1Q7RTP0 329 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 GALNTL5Q7Z4T8 443 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 PTAR1Q7Z6K3 402 aaPredicted RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 NRARPQ7Z6K4 114 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 PLA2G4DQ86XP0 818 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 KLHL7Q8IXQ5 586 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 KLHDC1Q8N7A1 406 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 FAM184AQ8NB25 1140 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 SLC37A3Q8NCC5 494 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 TRIM58Q8NG06 486 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 OR10Q1Q8NGQ4 319 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 OR2T6Q8NHC8 308 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 PPTC7Q8NI37 304 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 TMEM190Q8WZ59 177 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 SNX21Q969T3 373 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 PYCR2Q96C36 320 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 BSCL2Q96G97 398 aaPredicted RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 CDHR1Q96JP9 859 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 GLT1D1Q96MS3 346 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 SPATA33Q96N06 139 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 MBOAT7Q96N66 472 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 LITAFQ99732 161 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 SYT15Q9BQS2 421 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 MTG1Q9BT17 334 aaPredicted RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 FUCA2Q9BTY2 467 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 THUMPD3Q9BV44 507 aaKnown RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 TUBB2BQ9BVA1 445 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 RBM4Q9BWF3 364 aaKnown RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 EDEM3Q9BZQ6 932 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 RIMS4Q9H426 269 aaPredicted RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 Q9H8V8 135 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 GRPEL1Q9HAV7 217 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 FGF22Q9HCT0 170 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 ZNF71Q9NQZ8 489 aaPredicted RBP3.41□□□□□ -1.86
CD44-219ENST00000525685 ATAD3AQ9NVI7 634 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 ELP1O95163 1332 aa3.41□□□□□ -1.86
CD44-219ENST00000525685 MYH15Q9Y2K3 1946 aa3.4□□□□□ -1.86
CD44-219ENST00000525685 GSTTP1A0A1W2PQM5 241 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 HTR3EA5X5Y0 456 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SNURFLB1AK76 121 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 DDX39AO00148 427 aaKnown RBP3.4□□□□□ -1.87
CD44-219ENST00000525685 HAS3O00219 553 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 ZNF195O14628 629 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 FPGTO14772 594 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 PSMA7O14818 248 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SLC37A4O43826 429 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 MAGEC1O60732 1142 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 CABYRO75952 493 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 NXPH2O95156 264 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 NADKO95544 446 aaPredicted RBP3.4□□□□□ -1.87
CD44-219ENST00000525685 CCNE2O96020 404 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 GBAP04062 536 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SERPING1P05155 500 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 GPIP06744 558 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SPP1P10451 314 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 SOAT1P35610 550 aa3.4□□□□□ -1.87
CD44-219ENST00000525685 TCF7P36402 384 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms