RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 TRAF2Q12933 501 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 C1orf61Q13536 156 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 TAF1AQ15573 450 aaPredicted RBP4.05□□□□□ -1.76
HDAC2-216ENST00000523628 SMTNL2Q2TAL5 461 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 BCL7AQ4VC05 210 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 C2CD6Q53TS8 623 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 ZNF542PQ5EBM4 170 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 INTS11Q5TA45 600 aaKnown RBP4.05□□□□□ -1.76
HDAC2-216ENST00000523628 PRAMEF17Q5VTA0 474 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 C11orf87Q6NUJ2 197 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 NIPAL1Q6NVV3 410 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 TTC23LQ6PF05 361 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 SLC30A9Q6PML9 568 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 TMEM26Q6ZUK4 368 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 ARHGAP22Q7Z5H3 698 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 RAB43Q86YS6 212 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 NAGSQ8N159 534 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 PYROXD2Q8N2H3 581 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 NPWQ8N729 165 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 PNLDC1Q8NA58 520 aaKnown RBP4.05□□□□□ -1.76
HDAC2-216ENST00000523628 DDHD1Q8NEL9 900 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 LPCAT1Q8NF37 534 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 SEMA6DQ8NFY4 1073 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 C9orf43Q8TAL5 461 aaPredicted RBP4.05□□□□□ -1.76
HDAC2-216ENST00000523628 GSDMBQ8TAX9 411 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 GDAP1Q8TB36 358 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 HM13Q8TCT9 377 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 TRIM63Q969Q1 353 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 RNFT2Q96EX2 444 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 C9orf72Q96LT7 481 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 OLFM3Q96PB7 478 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 FCRL5Q96RD9 977 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 CTDSP1Q9GZU7 261 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 ABCG8Q9H221 673 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 MVB12BQ9H7P6 319 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 THAP1Q9NVV9 213 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 C5AR2Q9P296 337 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 NXT1Q9UKK6 140 aaKnown RBP4.05□□□□□ -1.76
HDAC2-216ENST00000523628 RARRES3Q9UL19 164 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 PADI1Q9ULC6 663 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 TTLL3Q9Y4R7 772 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 SIRT4Q9Y6E7 314 aaPredicted RBP4.05□□□□□ -1.76
HDAC2-216ENST00000523628 PIEZO2Q9H5I5 2752 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 AHCTF1Q8WYP5 2266 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 UNC13CQ8NB66 2214 aa4.05□□□□□ -1.76
HDAC2-216ENST00000523628 RP1P56715 2156 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 SETXQ7Z333 2677 aaKnown RBP4.04□□□□□ -1.76
HDAC2-216ENST00000523628 A0A087X0T9 212 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 LOC285095A0A1B0GVY8 99 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 MGAT4DA6NG13 374 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 A6NLC8 198 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 LINC01548A6NM66 108 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 PDZK1P1A8MUH7 402 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 C9J4A7 227 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 H3BMM5 538 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 J3KRW8 73 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 IFNL4K9M1U5 179 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 LIN7AO14910 233 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-216ENST00000523628 DSCR3O14972 297 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 TP73O15350 636 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 STX7O15400 261 aaKnown RBP4.04□□□□□ -1.76
HDAC2-216ENST00000523628 SLC28A2O43868 658 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 MFSD11O43934 449 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 DPM1O60762 260 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 STK17BO94768 372 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 LCA5LO95447 670 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 MLYCDO95822 493 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 DDAH2O95865 285 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 ALDOAP04075 364 aaKnown RBP4.04□□□□□ -1.76
HDAC2-216ENST00000523628 FAM228BP0C875 321 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 FGF5P12034 268 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 NELFEP18615 380 aaKnown RBP4.04□□□□□ -1.76
HDAC2-216ENST00000523628 MSH3P20585 1137 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 LHCGRP22888 699 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 CD1CP29017 333 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 CASP14P31944 242 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 SHMT2P34897 504 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 UGT1A3P35503 534 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 HSD17B2P37059 387 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 NSG1P42857 185 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 KLK7P49862 253 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 PMS2P54278 862 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 RWDD2BP57060 319 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 SKP1P63208 163 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 UBE2IP63279 158 aaKnown RBP4.04□□□□□ -1.76
HDAC2-216ENST00000523628 TUBB4BP68371 445 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 MPP1Q00013 466 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 CDK16Q00536 496 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 OGDHQ02218 1023 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 CDC20Q12834 499 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 TMEM115Q12893 351 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-216ENST00000523628 THOC5Q13769 683 aaKnown RBP4.04□□□□□ -1.76
HDAC2-216ENST00000523628 TUBB2AQ13885 445 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 CBFBQ13951 182 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 KRT33BQ14525 404 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 ITIH4Q14624 930 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 TMED2Q15363 201 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 INAQ16352 499 aa4.04□□□□□ -1.76
HDAC2-216ENST00000523628 LACTB2Q53H82 288 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-216ENST00000523628 MTX3Q5HYI7 312 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms