RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TRAPPC11Q7Z392 1133 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 CYP4Z1Q86W10 505 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 TMEM126BQ8IUX1 230 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 CCDC103Q8IW40 242 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SLITRK4Q8IW52 837 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 OFCC1Q8IZS5 231 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 C4orf33Q8N1A6 199 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 STX19Q8N4C7 294 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 TMEM102Q8N9M5 508 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 NETO2Q8NC67 525 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 STEAP2Q8NFT2 490 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF596Q8TC21 504 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 C2orf15Q8WU43 125 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 WFDC12Q8WWY7 111 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 DNASE1L2Q92874 299 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 RAB24Q969Q5 203 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SPSB4Q96A44 273 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 BSCL2Q96G97 398 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 PAGE5Q96GU1 130 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 MARS2Q96GW9 593 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 EAF1Q96JC9 268 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SLC45A3Q96JT2 553 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SLC41A2Q96JW4 573 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ZNF512Q96ME7 567 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SLITRK1Q96PX8 696 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 C11orf70Q9BRQ4 267 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 TSSK1BQ9BXA7 367 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 YTHDF1Q9BYJ9 559 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SLC2A11Q9BYW1 496 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 PKIBQ9C010 78 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ENKD1Q9H0I2 346 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ESRP2Q9H6T0 727 aaKnown RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SEBOXQ9HB31 216 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-216ENST00000523088 GOLGA2P5Q9HBQ8 144 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SCUBE2Q9NQ36 999 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 DMRT3Q9NQL9 472 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 ASAH2Q9NR71 780 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 CLEC5AQ9NY25 188 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 CD274Q9NZQ7 290 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 IL20RAQ9UHF4 553 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 RAB26Q9ULW5 256 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 SHOC2Q9UQ13 582 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 TRAF6Q9Y4K3 522 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 INSL5Q9Y5Q6 135 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 STYXL1Q9Y6J8 313 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 DENND4CQ5VZ89 1909 aa7.22□□□□□ -1.25
HDAC3-216ENST00000523088 A0A0G2JMP0 313 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SUPT3HB4E1H0 165 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 G3V2T6 193 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 KPNA3O00505 521 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ATXN7O15265 892 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 FFAR2O15552 330 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 PAPSS1O43252 624 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SLC28A2O43868 658 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 FAM189A1O60320 539 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 PLIN3O60664 434 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SLC43A1O75387 559 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 PMPCBO75439 489 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 POP7O75817 140 aaKnown RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SRP72O76094 671 aaKnown RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 UBXN7O94888 489 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 H6PDO95479 791 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 AK1P00568 194 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 GSNP06396 782 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 RHOP08100 348 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 CFHP08603 1231 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 CALCBP10092 127 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 NR2C1P13056 603 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ETS1P14921 441 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 TSHRP16473 764 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 CTPS1P17812 591 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SRMP19623 302 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 POU3F2P20265 443 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 C5AR1P21730 350 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 RPS19P39019 145 aaKnown RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 NBL1P41271 181 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 PIK3CBP42338 1070 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 BRCC3P46736 316 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 PREPP48147 710 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 TAF6P49848 677 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 EPHB3P54753 998 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 CDH13P55290 713 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 JAM2P57087 298 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 RPS7P62081 194 aaKnown RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SNRPFP62306 86 aaKnown RBP7.21□□□□□ -1.26
HDAC3-216ENST00000523088 NOMO3P69849 1222 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SEMA3BQ13214 749 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SCGB2A2Q13296 93 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 GPR17Q13304 367 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 GAMTQ14353 236 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 NOMO1Q15155 1222 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 GRK1Q15835 563 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SV2CQ496J9 727 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 HIKESHIQ53FT3 197 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF667Q5HYK9 610 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 OR2B11Q5JQS5 317 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 COLEC12Q5KU26 742 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 SLC35D3Q5M8T2 416 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 OVOS1Q6IE37 1185 aa7.21□□□□□ -1.26
HDAC3-216ENST00000523088 MRNIPQ6NTE8 343 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms