RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 BTG1P62324 171 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 HERV-K104P63124 156 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 CCZ1BP86790 482 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 CCZ1P86791 482 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 ITPK1Q13572 414 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 HEPACAMQ14CZ8 416 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 DNAJC21Q5F1R6 531 aaKnown RBP3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 TEX35Q5T0J7 233 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 FIP1L1Q6UN15 594 aaKnown RBP3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 TMEM64Q6YI46 380 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 WDR88Q6ZMY6 472 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 RBM43Q6ZSC3 357 aaKnown RBP3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 RNF148Q8N7C7 305 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 NIPA2Q8N8Q9 360 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 TMEM178AQ8NBL3 297 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 GPRC5AQ8NFJ5 357 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 NEK11Q8NG66 645 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 OR5T2Q8NGG2 359 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 OR56B1Q8NGI3 324 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 OR4L1Q8NH43 312 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 SUSD6Q92537 303 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 TBC1D31Q96DN5 1066 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 NECTIN4Q96NY8 510 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 ERGIC2Q96RQ1 377 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 LITAFQ99732 161 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 FTHL17Q9BXU8 183 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 KRT23Q9C075 422 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 HOXD1Q9GZZ0 328 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 LIN28AQ9H9Z2 209 aaKnown RBP3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 SOHLH2Q9NX45 425 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 ZNF319Q9P2F9 582 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 DBF4Q9UBU7 674 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 POMT2Q9UKY4 750 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 EXOC7Q9UPT5 735 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 NCKAP1Q9Y2A7 1128 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 ANGPTL3Q9Y5C1 460 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 FER1L5A0AVI2 2057 aa3.98□□□□□ -1.77
HMGB1P1-201ENST00000522557 ARHGAP42A6NI28 874 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 SHISA7A6NL88 538 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 F8WDY8 70 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 SURF4O15260 269 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 NXPH4O95158 308 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 SFTPBP07988 381 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 CTNNA2P26232 953 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 CCND2P30279 289 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 HLA-FP30511 346 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 MAP2K2P36507 400 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 FEN1P39748 380 aaKnown RBP3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 SLC1A3P43003 542 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 NSFP46459 744 aaKnown RBP3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 ASMTP46597 345 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 FHITP49789 147 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 ATP12AP54707 1039 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 PAX9P55771 341 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 PPP1R8Q12972 351 aaKnown RBP3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 TRADDQ15628 312 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 C3AR1Q16581 482 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 FGD3Q5JSP0 725 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 FFAR4Q5NUL3 377 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 SNRNP48Q6IEG0 339 aaKnown RBP3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 OR6B2Q6IFH4 312 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 FAM159AQ6UWV7 190 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 Q6ZSR9 355 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 TAF8Q7Z7C8 310 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 OR4N5Q8IXE1 308 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 TCEANCQ8N8B7 351 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 GPR148Q8TDV2 347 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 C16orf58Q96GQ5 468 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 RAB40CQ96S21 281 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 KRT12Q99456 494 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 FSD1Q9BTV5 496 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 WWP1Q9H0M0 922 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 CXXC4Q9H2H0 198 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 ECT2Q9H8V3 914 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 GPN1Q9HCN4 374 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 STARD5Q9NSY2 213 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 INTS10Q9NVR2 710 aaKnown RBP3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 CNOT2Q9NZN8 540 aaKnown RBP3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 FAM153AQ9UHL3 310 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 WDR37Q9Y2I8 494 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 OR1A2Q9Y585 309 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 SELENOKQ9Y6D0 94 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 FGD5Q6ZNL6 1462 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 RB1CC1Q8TDY2 1594 aa3.97□□□□□ -1.77
HMGB1P1-201ENST00000522557 SH3PXD2BA1X283 911 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 MEIOCA2RUB1 952 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 A8MU76 341 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 K7EPI3 171 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 K7EQD1 137 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 ZNF195O14628 629 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 RASGRF2O14827 1237 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 SIGLEC5O15389 551 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 OR6B1O95007 311 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 GAS8O95995 478 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 MT-ATP6P00846 226 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 ZCCHC18P0CG32 403 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 KRT5P13647 590 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 CPA3P15088 417 aa3.96□□□□□ -1.78
HMGB1P1-201ENST00000522557 ZNF18P17022 549 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms