RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 NDUFAF5Q5TEU4 345 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 PARM1Q6UWI2 310 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 CBLL1Q75N03 491 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SLC9B2Q86UD5 537 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 GATAD2AQ86YP4 633 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 CHDHQ8NE62 594 aaPredicted RBP9.69□□□□□ -0.86
MCF2-209ENST00000520602 MCFD2Q8NI22 146 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 PSMA8Q8TAA3 256 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 BORCS5Q969J3 196 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 TMEM19Q96HH6 336 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 OR2M4Q96R27 311 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 PBX4Q9BYU1 374 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 NTN4Q9HB63 628 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SELENONQ9NZV5 590 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SH2B3Q9UQQ2 575 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 HCN4Q9Y3Q4 1203 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 TSC2P49815 1807 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 AREL1O15033 823 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 AIREO43918 545 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 H1F0P07305 194 aaKnown RBP9.69□□□□□ -0.86
MCF2-209ENST00000520602 MYL12AP19105 171 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 VBP1P61758 197 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SNAPC1Q16533 368 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 LCTLQ6UWM7 567 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 KLHDC8AQ8IYD2 350 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 HCAR2Q8TDS4 363 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 NUAK2Q9H093 628 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SERHLQ9NQF3 203 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 ABCB10Q9NRK6 738 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 NDOR1Q9UHB4 597 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SNX7Q9UNH6 387 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 POFUT2Q9Y2G5 429 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 CCDC85CA6NKD9 419 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SNTNA6NMZ2 147 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 TYRP1P17643 537 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 CRHBPP24387 322 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 PSMA3P25788 255 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 IFNGR2P38484 337 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 CLCN2P51788 898 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 APOFQ13790 326 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 DEFB134Q4QY38 66 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 PRSS36Q5K4E3 855 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 TMEM236Q5W0B7 351 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 OR4C11Q6IEV9 310 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 ZNF765Q7L2R6 523 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 TMEM179BQ7Z7N9 219 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 OR4N5Q8IXE1 308 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 RIMKLAQ8IXN7 391 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SPARTQ8N0X7 666 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 ZFP90Q8TF47 636 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SGCDQ92629 289 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 KAT2AQ92830 837 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 UBE2FQ969M7 185 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 SLC7A5P2Q9GIP4 190 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 TOR4AQ9NXH8 423 aa9.69□□□□□ -0.86
MCF2-209ENST00000520602 THAP10Q9P2Z0 257 aaPredicted RBP9.69□□□□□ -0.86
MCF2-209ENST00000520602 ANHXE9PGG2 379 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 J3KTA2 159 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 DLGAP3O95886 979 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 ALOX12P18054 663 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 IL18R1Q13478 541 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 C1orf61Q13536 156 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 BCL7AQ4VC05 210 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 ZNF385BQ569K4 471 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 PRRT3Q5FWE3 981 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 PLEKHM3Q6ZWE6 761 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 TRIM73Q86UV7 250 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 METTL4Q8N3J2 472 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 DEFB119Q8N690 84 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 AMER2Q8N7J2 671 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 KCT2Q8NC54 265 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 PAPD5Q8NDF8 572 aaKnown RBP9.68□□□□□ -0.86
MCF2-209ENST00000520602 OR5D16Q8NGK9 328 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 Q96MT0 163 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 FUNDC2Q9BWH2 189 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 AMBRA1Q9C0C7 1298 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 EPHX3Q9H6B9 360 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 H3BMQ9 156 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 GFRA2O00451 464 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 ATE1O95260 518 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 APOA1P02647 267 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 FURINP09958 794 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 TFPTP0C1Z6 253 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 PCGF2P35227 344 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 KHKP50053 298 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 RNF144AP50876 292 aaPredicted RBP9.68□□□□□ -0.86
MCF2-209ENST00000520602 DAPP51397 102 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 ADARB1P78563 741 aaKnown RBP9.68□□□□□ -0.86
MCF2-209ENST00000520602 KCNC4Q03721 635 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 NCF4Q15080 339 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 TIGD6Q17RP2 521 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 RGS21Q2M5E4 152 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 CLEC12AQ5QGZ9 265 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 C10orf111Q8N326 155 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 C10orf53Q8N6V4 93 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 FAM46DQ8NEK8 389 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 OR52E1Q8NGJ3 308 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 OR5K2Q8NHB8 316 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 COG8Q96MW5 612 aa9.68□□□□□ -0.86
MCF2-209ENST00000520602 BARD1Q99728 777 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms