RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CSF3P09919 207 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 GPR89BP0CG08 455 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ITGAMP11215 1152 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 CYP2A6P11509 494 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PECAM1P16284 738 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 GM2AP17900 193 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 FSTP19883 344 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 HLA-DPA1P20036 260 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 XPAP23025 273 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 CCND1P24385 295 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 FPR2P25090 351 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PSMA3P25788 255 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 GKP32189 559 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 VIPR1P32241 457 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 HMGCLP35914 325 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 GJC1P36383 396 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 FDFT1P37268 417 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 MMP12P39900 470 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SKIV2L2P42285 1042 aaKnown RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 MAGEA6P43360 314 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 RGRP47804 291 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ATP5OP48047 213 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 MARCKSL1P49006 195 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 RPS6KA3P51812 740 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 GEMP55040 296 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ADARP55265 1226 aaKnown RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 EIF3EP60228 445 aaKnown RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 DYNLT1P63172 113 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 TNFRSF17Q02223 184 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 DHX9Q08211 1270 aaKnown RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 NIPAL4Q0D2K0 466 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ZBTB17Q13105 803 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 MPP2Q14168 576 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 KIR2DS5Q14953 304 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 LAPTM4AQ15012 233 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PPP1R7Q15435 360 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SIX1Q15475 284 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 CYP1B1Q16678 543 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 KRT71Q3SY84 523 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 NKAIN1Q4KMZ8 207 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ANKRD20A2Q5SQ80 823 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 TMTC4Q5T4D3 741 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ANKRD20A1Q5TYW2 823 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 GKAP1Q5VSY0 366 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ANKRD20A3Q5VUR7 823 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 KCTD11Q693B1 232 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PDPK2PQ6A1A2 396 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 OR52E8Q6IFG1 317 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 DENND5AQ6IQ26 1287 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 DARS2Q6PI48 645 aaKnown RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PAOXQ6QHF9 649 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 RANBP10Q6VN20 620 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ARHGAP36Q6ZRI8 547 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 RIPOR1Q6ZS17 1223 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SYDE1Q6ZW31 735 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 DPPA4Q7L190 304 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 NLRP9Q7RTR0 991 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PID1Q7Z2X4 250 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 LINC00523Q86TU6 105 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 CAMK1DQ8IU85 385 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 CNTN4Q8IWV2 1026 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 BEST3Q8N1M1 668 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PGBD5Q8N414 524 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 RYBPQ8N488 228 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 AMER2Q8N7J2 671 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 AVL9Q8NBF6 648 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SDR9C7Q8NEX9 313 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SPDYE1Q8NFV5 336 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 LILRB1Q8NHL6 650 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 C16orf52Q8NHV5 167 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 GRK7Q8WTQ7 553 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ZFPM2Q8WW38 1151 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PIH1D2Q8WWB5 315 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PEX13Q92968 403 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 FAM136AQ96C01 138 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SPDL1Q96EA4 605 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 THOC1Q96FV9 657 aaKnown RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 RMDN2Q96LZ7 410 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 COQ10AQ96MF6 247 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ANKRD27Q96NW4 1050 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 OR2M4Q96R27 311 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 TRIB3Q96RU7 358 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 INSM2Q96T92 566 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SPSB2Q99619 263 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SH3GL3Q99963 347 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 HERPUD2Q9BSE4 406 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PIMREGQ9BSJ6 248 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 AP1M1Q9BXS5 423 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 TM6SF2Q9BZW4 377 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 GBA3Q9H227 469 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 LRRC40Q9H9A6 602 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 FANCEQ9HB96 536 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PCDH9Q9HC56 1237 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 NT5MQ9NPB1 228 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PCDH12Q9NPG4 1184 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 EIF2B3Q9NR50 452 aaKnown RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 FAM114A2Q9NRY5 505 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC22A11Q9NSA0 550 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 EURLQ9NYK6 297 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms