RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 ACADSP16219 412 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 IL1RNP18510 177 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 CHI3L1P36222 383 aaPredicted RBP19.06■□□□□ 0.64
TRIO-223ENST00000515710 VAC14Q08AM6 782 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 FADDQ13158 208 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 PTOV1Q86YD1 416 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 KBTBD2Q8IY47 623 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 CLEC4FQ8N1N0 589 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 C19orf47Q8N9M1 422 aaKnown RBP19.06■□□□□ 0.64
TRIO-223ENST00000515710 NETO1Q8TDF5 533 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 SLAMF7Q9NQ25 335 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 PHF11Q9UIL8 331 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 UTS2RQ9UKP6 389 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 DTNAQ9Y4J8 743 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 BMP2P12643 396 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 ARRB1P49407 418 aaPredicted RBP19.06■□□□□ 0.64
TRIO-223ENST00000515710 CHRNB3Q05901 458 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 BNIP3Q12983 259 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 HMBOX1Q6NT76 420 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 IRGCQ6NXR0 463 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 PDSS2Q86YH6 399 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 EID3Q8N140 333 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 ZFP28Q8NHY6 868 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 PSMA8Q8TAA3 256 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 UCN3Q969E3 161 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 SEPHS2Q99611 448 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 CXorf36Q9H7Y0 433 aa19.06■□□□□ 0.64
TRIO-223ENST00000515710 B3GALT2O43825 422 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 AIFM1O95831 613 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 EIF2S1P05198 315 aaKnown RBP19.05■□□□□ 0.64
TRIO-223ENST00000515710 RAP2AP10114 183 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 ALOX12P18054 663 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 ATP6V1C1P21283 382 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 NTSP30990 170 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 SOAT1P35610 550 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 MVDP53602 400 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 ADRM1Q16186 407 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 PLK5Q496M5 336 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 SLC48A1Q6P1K1 146 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 MAML2Q8IZL2 1156 aaPredicted RBP19.05■□□□□ 0.64
TRIO-223ENST00000515710 SLC25A45Q8N413 288 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 CSNK1A1LQ8N752 337 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 ANKFN1Q8N957 763 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 TCTN2Q96GX1 697 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 NAF1Q96HR8 494 aaKnown RBP19.05■□□□□ 0.64
TRIO-223ENST00000515710 MAPKAP1Q9BPZ7 522 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 CCDC3Q9BQI4 270 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 EPS8L2Q9H6S3 715 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 IL21RQ9HBE5 538 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 AGPAT4Q9NRZ5 378 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 C5AR2Q9P296 337 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 EPHA6Q9UF33 1036 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 PILRBQ9UKJ0 227 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 CES1P1Q9UKY3 287 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 CNOT11Q9UKZ1 510 aaKnown RBP19.05■□□□□ 0.64
TRIO-223ENST00000515710 PSME2Q9UL46 239 aa19.05■□□□□ 0.64
TRIO-223ENST00000515710 TXNDC9O14530 226 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 SH3BP5O60239 455 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 CRATP43155 626 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 RBBP4Q09028 425 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 SRSF5Q13243 272 aaKnown RBP19.04■□□□□ 0.64
TRIO-223ENST00000515710 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.04■□□□□ 0.64
TRIO-223ENST00000515710 TMEM214Q6NUQ4 689 aaKnown RBP19.04■□□□□ 0.64
TRIO-223ENST00000515710 ANGPTL8Q6UXH0 198 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 AMIGO2Q86SJ2 522 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 ARL10Q8N8L6 244 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 FBXO30Q8TB52 745 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 ZCCHC10Q8TBK6 192 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 RNF145Q96MT1 663 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 NECAB3Q96P71 396 aaPredicted RBP19.04■□□□□ 0.64
TRIO-223ENST00000515710 BBS4Q96RK4 519 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 CHID1Q9BWS9 393 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 SEMA6AQ9H2E6 1030 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 PRDM9Q9NQV7 894 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 DNAAF2Q9NVR5 837 aaKnown RBP19.04■□□□□ 0.64
TRIO-223ENST00000515710 GPATCH2Q9NW75 528 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 MS4A12Q9NXJ0 267 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 LRIT1Q9P2V4 623 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 FAF1Q9UNN5 650 aaPredicted RBP19.04■□□□□ 0.64
TRIO-223ENST00000515710 RNF215Q9Y6U7 377 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 MDC1Q14676 2089 aaKnown RBP19.04■□□□□ 0.64
TRIO-223ENST00000515710 THADAQ6YHU6 1953 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 SLC9B1P1A6NJY1 282 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 MYO1GB0I1T2 1018 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 PGRMC2O15173 223 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 NUDT21O43809 227 aaKnown RBP19.04■□□□□ 0.64
TRIO-223ENST00000515710 SRPX2O60687 465 aaPredicted RBP19.04■□□□□ 0.64
TRIO-223ENST00000515710 SERPINA1P01009 418 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 BUD31P41223 144 aaPredicted RBP19.04■□□□□ 0.64
TRIO-223ENST00000515710 BNC1Q01954 994 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 BLMHQ13867 455 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 SFT2D3Q587I9 215 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 C18orf63Q68DL7 685 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 FAM180BQ6P0A1 224 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 DNAJC22Q8N4W6 341 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 C11orf65Q8NCR3 313 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 FAM110BQ8TC76 370 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 CD180Q99467 661 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 MAP3K3Q99759 626 aa19.04■□□□□ 0.64
TRIO-223ENST00000515710 VCXQ9H320 206 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms