RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PHPT1Q9NRX4 125 aaPredicted RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 CHCHD3Q9NX63 227 aaKnown RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 BAIAP2L1Q9UHR4 511 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 ZNF107Q9UII5 783 aaPredicted RBP2.99□□□□□ -1.93
LINC01088-211ENST00000515597 NSG2Q9Y328 171 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 NOS1P29475 1434 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 NRAPQ86VF7 1730 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 METP08581 1390 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 MAP3K5Q99683 1374 aa2.99□□□□□ -1.93
LINC01088-211ENST00000515597 DLC1Q96QB1 1528 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 MYO5BQ9ULV0 1848 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 PHRF1Q9P1Y6 1649 aaKnown RBP2.98□□□□□ -1.93
LINC01088-211ENST00000515597 TRAV34A0A0B4J273 112 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 TCP10L2B9ZVM9 353 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 PRSS46E5RG02 174 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 H3BMM5 538 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 PGRMC2O15173 223 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 MTRF1O75570 445 aaKnown RBP2.98□□□□□ -1.93
LINC01088-211ENST00000515597 HSPA4LO95757 839 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 RPLP0P05388 317 aaKnown RBP2.98□□□□□ -1.93
LINC01088-211ENST00000515597 SP9P0CG40 484 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 IFNAR1P17181 557 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 C4BPBP20851 252 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 GIFP27352 417 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 GPR183P32249 361 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 DUTP33316 252 aaKnown RBP2.98□□□□□ -1.93
LINC01088-211ENST00000515597 KIAA0141Q14154 515 aaPredicted RBP2.98□□□□□ -1.93
LINC01088-211ENST00000515597 GRB14Q14449 540 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 UPP1Q16831 310 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 FAM133BQ5BKY9 247 aaKnown RBP2.98□□□□□ -1.93
LINC01088-211ENST00000515597 FAM46CQ5VWP2 391 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 BTNL8Q6UX41 500 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 TMEM182Q6ZP80 229 aaPredicted RBP2.98□□□□□ -1.93
LINC01088-211ENST00000515597 OR52B6Q8NGF0 335 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 RPLP0P6Q8NHW5 317 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 OCC1Q8TAD7 63 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 TYMSOSQ8TAI1 123 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 SSC4DQ8WTU2 575 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 DEPDC1BQ8WUY9 529 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 RIT1Q92963 219 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 CITED2Q99967 270 aaPredicted RBP2.98□□□□□ -1.93
LINC01088-211ENST00000515597 LMAN1LQ9HAT1 526 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 POMT2Q9UKY4 750 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 CELA1Q9UNI1 258 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 NCKAP1Q9Y2A7 1128 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 POMT1Q9Y6A1 747 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 DCCP43146 1447 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 NALCNQ8IZF0 1738 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 CROCC2H7BZ55 1655 aa2.98□□□□□ -1.93
LINC01088-211ENST00000515597 PLEKHH2Q8IVE3 1493 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 XRN1Q8IZH2 1706 aaKnown RBP2.97□□□□□ -1.93
LINC01088-211ENST00000515597 ARHGAP31Q2M1Z3 1444 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 ZNF840PA6NDX5 716 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 C5orf52A6NGY3 159 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 GOT1P17174 413 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 CTNNA2P26232 953 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 PSMB4P28070 264 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 PKLRP30613 574 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 ATP4BP51164 291 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 PTENP60484 403 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 ZNF542PQ5EBM4 170 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.97□□□□□ -1.93
LINC01088-211ENST00000515597 CAVIN1Q6NZI2 390 aaKnown RBP2.97□□□□□ -1.93
LINC01088-211ENST00000515597 CASC4Q6P4E1 433 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 DHRS11Q6UWP2 260 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 BAIAP2L2Q6UXY1 529 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 MSANTD1Q6ZTZ1 278 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 C15orf52Q6ZUT6 534 aaKnown RBP2.97□□□□□ -1.93
LINC01088-211ENST00000515597 COX8CQ7Z4L0 72 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 MEX3DQ86XN8 651 aaKnown RBP2.97□□□□□ -1.93
LINC01088-211ENST00000515597 CSNK1G2-AS1Q8NCQ2 148 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 SPPL2AQ8TCT8 520 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 DNASE1L2Q92874 299 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 C11orf52Q96A22 123 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 EXOC4Q96A65 974 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 BSCL2Q96G97 398 aaPredicted RBP2.97□□□□□ -1.93
LINC01088-211ENST00000515597 LURAP1Q96LR2 239 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 TSSK2Q96PF2 358 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 INTS14Q96SY0 518 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 CCDC28BQ9BUN5 200 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 OCR1Q9BZK8 76 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 DPEP2Q9H4A9 486 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 JPT2Q9H910 190 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 C3orf14Q9HBI5 128 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 TMOD3Q9NYL9 352 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 KLK11Q9UBX7 282 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 GMEB2Q9UKD1 530 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 ITGA11Q9UKX5 1188 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 PLCL2Q9UPR0 1127 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 KLK4Q9Y5K2 254 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 PLCH1Q4KWH8 1693 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 HEG1Q9ULI3 1381 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 USP32Q8NFA0 1604 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 NRXN3Q9Y4C0 1643 aa2.97□□□□□ -1.93
LINC01088-211ENST00000515597 RIMS2Q9UQ26 1411 aa2.96□□□□□ -1.94
LINC01088-211ENST00000515597 A0A087WWV3 80 aa2.96□□□□□ -1.94
LINC01088-211ENST00000515597 GLTPD2A6NH11 291 aa2.96□□□□□ -1.94
LINC01088-211ENST00000515597 ARHGEF33A8MVX0 844 aa2.96□□□□□ -1.94
LINC01088-211ENST00000515597 IFIT3O14879 490 aaKnown RBP2.96□□□□□ -1.94
LINC01088-211ENST00000515597 MAGEB2O15479 319 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms