RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TMEM52Q8NDY8 209 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 B3GNT7Q8NFL0 401 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 OR4F6Q8NGB9 312 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 L3HYPDHQ96EM0 354 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 ZNF382Q96SR6 550 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 CSF3RQ99062 836 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 ZNF717Q9BY31 904 aaPredicted RBP11.96□□□□□ -0.49
CLCN3-210ENST00000515420 DDX31Q9H8H2 851 aaKnown RBP11.96□□□□□ -0.49
CLCN3-210ENST00000515420 BRF2Q9HAW0 419 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 LUZP4Q9P127 313 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 TRPS1Q9UHF7 1281 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 GRID1Q9ULK0 1009 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 SNX6Q9UNH7 406 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 PCDHGB6Q9Y5F9 930 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 ESPL1Q14674 2120 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 A0A0A6YYD5 115 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 TGFBR3LH3BV60 316 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 GOLGA8RI6L899 631 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 MLYCDO95822 493 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 KRT15P19012 456 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 CPN2P22792 545 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 TLX1P31314 330 aaPredicted RBP11.95□□□□□ -0.5
CLCN3-210ENST00000515420 CRHR1P34998 444 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 BSGP35613 385 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 BUD31P41223 144 aaPredicted RBP11.95□□□□□ -0.5
CLCN3-210ENST00000515420 CCT5P48643 541 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 HNRNPFP52597 415 aaKnown RBP11.95□□□□□ -0.5
CLCN3-210ENST00000515420 PRKAA2P54646 552 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 IGLV3-21P80748 117 aaPredicted RBP11.95□□□□□ -0.5
CLCN3-210ENST00000515420 CLCQ05315 142 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 TTC19Q6DKK2 380 aaPredicted RBP11.95□□□□□ -0.5
CLCN3-210ENST00000515420 MRM1Q6IN84 353 aaKnown RBP11.95□□□□□ -0.5
CLCN3-210ENST00000515420 LETMD1Q6P1Q0 360 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 GPR180Q86V85 440 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 NUDT13Q86X67 352 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 CYP4X1Q8N118 509 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 TMEM132CQ8N3T6 1108 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 APCDD1LQ8NCL9 501 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 SUN3Q8TAQ9 357 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 RDH11Q8TC12 318 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 AENQ8WTP8 325 aaKnown RBP11.95□□□□□ -0.5
CLCN3-210ENST00000515420 TANKQ92844 425 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 CAVIN3Q969G5 261 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 CDK15Q96Q40 435 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 TMEM237Q96Q45 408 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 AGPAT4Q9NRZ5 378 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 AHSPQ9NZD4 102 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 VTI1BQ9UEU0 232 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 ADAM29Q9UKF5 820 aa11.95□□□□□ -0.5
CLCN3-210ENST00000515420 COPG1Q9Y678 874 aaKnown RBP11.95□□□□□ -0.5
CLCN3-210ENST00000515420 A0A1W2PPM1 405 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 CLEC18AA5D8T8 446 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 A8MUI8 341 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 H3BQF6 201 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 SAP18O00422 153 aaKnown RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 SH3BGRLO75368 114 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 MYO1DO94832 1006 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 SUPT7LO94864 414 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 ETHE1O95571 254 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 HSD3B1P14060 373 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 HSD3B2P26439 372 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 SLCO1A2P46721 670 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 CLCN2P51788 898 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 GPR143P51810 404 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 NEK2P51955 445 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 CDH13P55290 713 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 PKNOX1P55347 436 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 TNFRSF17Q02223 184 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 SLC18A2Q05940 514 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 STX4Q12846 297 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 LCP2Q13094 533 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 SLAMF1Q13291 335 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 UNC50Q53HI1 259 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 PRR30Q53SZ7 412 aaPredicted RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 CLEC18BQ6UXF7 455 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 PAGE2Q7Z2X7 111 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 CRLF3Q8IUI8 442 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 BEST3Q8N1M1 668 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 RNF175Q8N4F7 328 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 CISD2Q8N5K1 135 aaKnown RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 CLEC18CQ8NCF0 446 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 MORN4Q8NDC4 146 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 OR1N1Q8NGS0 311 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 OR14A16Q8NHC5 309 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 EPS8L3Q8TE67 593 aaKnown RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 DAZLQ92904 295 aaKnown RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 VMP1Q96GC9 406 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 NPAS2Q99743 824 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 ALOXE3Q9BYJ1 711 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 ROPN1BQ9BZX4 212 aaPredicted RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 ELOVL6Q9H5J4 265 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 RPF2Q9H7B2 306 aaKnown RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 TRIM45Q9H8W5 580 aaPredicted RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 ROPN1Q9HAT0 212 aaPredicted RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 PNO1Q9NRX1 252 aaKnown RBP11.94□□□□□ -0.5
CLCN3-210ENST00000515420 ASF1BQ9NVP2 202 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 NMRK1Q9NWW6 199 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 MKS1Q9NXB0 559 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 MID2Q9UJV3 735 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms