RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 RGRP47804 291 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ARSFP54793 590 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 GMFBP60983 142 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 GRK1Q15835 563 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 KRTCAP3Q53RY4 240 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF678Q5SXM1 525 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 LAYNQ6UX15 382 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 C16orf89Q6UX73 402 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 GK5Q6ZS86 529 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 LINC00299Q6ZSB3 139 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 CFAP52Q8N1V2 620 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 MINDY1Q8N5J2 469 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 OR6Q1Q8NGQ2 317 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 LRIG1Q96JA1 1093 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 SEPT5Q99719 369 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 PKP2Q99959 881 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 GTSE1Q9NYZ3 720 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 GNG14A0A1W2PPG7 69 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ACOT8O14734 319 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TLR5O60602 858 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TRIM3O75382 744 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TRAPPC2P0DI81 140 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TRAPPC2BP0DI82 140 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 BMP1P13497 986 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ADRB3P13945 408 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 SGSHP51688 502 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ACTR1AP61163 376 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 FGL1Q08830 312 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 STX4Q12846 297 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 INPP5AQ14642 412 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 HIST2H2ACQ16777 129 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 UGT3A2Q3SY77 523 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 MGAT5BQ3V5L5 792 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TMEM35AQ53FP2 167 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 Q5PR19 223 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 LIPJQ5W064 366 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 LRRC8DQ7L1W4 858 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 CAMKMTQ7Z624 323 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 RAB43Q86YS6 212 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 OR8J2Q8NGG1 315 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 SLC7A6Q92536 515 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 REPS1Q96D71 796 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 PHF21BQ96EK2 531 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TSPAN17Q96FV3 270 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 RHOVQ96L33 236 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF558Q96NG5 402 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM193BQ96PV7 902 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 MGME1Q9BQP7 344 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TTLL2Q9BWV7 592 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 ALG9Q9H6U8 611 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 TLR9Q9NR96 1032 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 MYEF2Q9P2K5 600 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 NDRG3Q9UGV2 375 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 CA5BQ9Y2D0 317 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 GRIP1Q9Y3R0 1128 aa7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 DNMT3AQ9Y6K1 912 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-219ENST00000514743 STX7O15400 261 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ADAM12O43184 909 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 WBP4O75554 376 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CBX7O95931 251 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 FGF1P05230 155 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PIRTP0C851 137 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 MTHFD2P13995 350 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF37AP17032 561 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 HLA-DPA1P20036 260 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 MAPK3P27361 379 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 OR4D1Q15615 310 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 FLYWCH1Q4VC44 716 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 UNC50Q53HI1 259 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 LCN1P1Q5VSP4 162 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM45BPQ6NSW5 357 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 C8orf82Q6P1X6 216 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 RBMS3Q6XE24 437 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 C16orf59Q7L2K0 433 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PAGE2Q7Z2X7 111 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ADGRD2Q7Z7M1 963 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 SVOPQ8N4V2 548 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 PLA2G15Q8NCC3 412 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM83FQ8NEG4 500 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM45AQ8TCE6 357 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CCDC126Q96EE4 140 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 C14orf144Q96I85 54 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF597Q96LX8 424 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 C3orf30Q96M34 536 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ASB16Q96NS5 453 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 OR5M11Q96RB7 305 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM129BQ96TA1 746 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 CSF3RQ99062 836 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ANKRD60Q9BZ19 345 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ASPSCR1Q9BZE9 553 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 WDR41Q9HAD4 459 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 ADA2Q9NZK5 511 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 NUFIP1Q9UHK0 495 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 IKZF3Q9UKT9 509 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 WASF3Q9UPY6 502 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 BTBD3Q9Y2F9 522 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 NPFFR2Q9Y5X5 522 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 U3KQV3 271 aa7.16□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM234BA2RU67 622 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms