RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PLEKHA3Q9HB20 300 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 MED17Q9NVC6 651 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 PLEK2Q9NYT0 353 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 PAK5Q9P286 719 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 MUTYHQ9UIF7 546 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 UMODL1Q5DID0 1318 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 IQCMA0A1B0GVH7 501 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 ARHGEF33A8MVX0 844 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 TRAFD1O14545 582 aaPredicted RBP4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 INPP4BO15327 924 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 PI15O43692 258 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 VEGFDO43915 354 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 CPNE6O95741 557 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 OLFM2O95897 454 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 CD1DP15813 335 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 GLRA1P23415 457 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 FCGR2BP31994 310 aaPredicted RBP4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 FCGR2CP31995 323 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 CRYBA2P53672 197 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 GABPAQ06546 454 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 NPRL3Q12980 569 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 PDE7AQ13946 482 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 WSCD2Q2TBF2 565 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 MS4A18Q3C1V0 323 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 SNAI3Q3KNW1 292 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 RFTN2Q52LD8 501 aaPredicted RBP4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 EPC2Q52LR7 807 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 CD164L2Q6UWJ8 174 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 MCM10Q7L590 875 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 Q8N377 158 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 SIDT2Q8NBJ9 832 aaKnown RBP4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 UBTD2Q8WUN7 234 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 PCED1BQ96HM7 432 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 SLC45A3Q96JT2 553 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 PRAM1Q96QH2 718 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 ATOH8Q96SQ7 321 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 AGPAT1Q99943 283 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 EGLN1Q9GZT9 426 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 CXXC4Q9H2H0 198 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 EXOC7Q9UPT5 735 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 ERVK-19Q9WJR5 959 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 TEX264Q9Y6I9 313 aa4.2□□□□□ -1.74
HMGCS1-207ENST00000514610 IGLV4-3A0A075B6K6 122 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 TRBV5-4A0A0C4DH59 114 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 SH3PXD2BA1X283 911 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 OR5H15A6NDH6 313 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 ASB14A6NK59 587 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 K7EQG2 157 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 GAS8O95995 478 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 LYNP07948 512 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 UGT1A6P19224 532 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 CYP3A5P20815 502 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 GPX3P22352 226 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 ETV5P41161 510 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 PAX8Q06710 450 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 CD300CQ08708 224 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 RBBP4Q09028 425 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 AP1B1Q10567 949 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 RIGQ13278 110 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 MEF2DQ14814 521 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 HEPACAMQ14CZ8 416 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 PAQR6Q6TCH4 344 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNF410Q86VK4 478 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNF485Q8NCK3 441 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 OR4A16Q8NH70 328 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 SPPL2AQ8TCT8 520 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 GANCQ8TET4 914 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 NABP1Q96AH0 204 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 MRPL53Q96EL3 112 aaKnown RBP4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 CCDC43Q96MW1 224 aaKnown RBP4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 ATP6V0BQ99437 205 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 S1PR3Q99500 378 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 TRIM7Q9C029 511 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 CYP39A1Q9NYL5 469 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 TECRQ9NZ01 308 aaKnown RBP4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 CTSZQ9UBR2 303 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 CACNA1FO60840 1977 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 PCNX3Q9H6A9 2034 aa4.19□□□□□ -1.74
HMGCS1-207ENST00000514610 A0A1W2PPR1 153 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 A8MXK9 166 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 KERAO60938 352 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 CSO75390 466 aaKnown RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 CRLF1O75462 422 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 VDRP11473 427 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 PCP11498 1178 aaKnown RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNF10P21506 573 aaPredicted RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 ATP4BP51164 291 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 NDUFV3P56181 108 aaKnown RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 YBEYP58557 167 aaPredicted RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 RPS27AP62979 156 aaKnown RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 UBXN1Q04323 297 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 OR1C1Q15619 314 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 LPAL2Q16609 132 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 STX1AQ16623 288 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 ALKBH5Q6P6C2 394 aaKnown RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 METTL7BQ6UX53 244 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNF730Q6ZMV8 503 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 GPRIN3Q6ZVF9 776 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 RAPH1Q70E73 1250 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 FBXW8Q8N3Y1 598 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms