RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 TSPAN33Q86UF1 283 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 TSPYL5Q86VY4 417 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-213ENST00000514442 COX18Q8N8Q8 333 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 GPR151Q8TDV0 419 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 AIG1Q9NVV5 245 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 GLTPQ9NZD2 209 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 DIRAS1O95057 198 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 JUNP05412 331 aaKnown RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 EVI2BP34910 448 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 ETV1P50549 477 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 GRIK2Q13002 908 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 DHCR24Q15392 516 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 TEAD4Q15561 434 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 PXDC1Q5TGL8 231 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 NRARPQ7Z6K4 114 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 STX12Q86Y82 276 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 GDPD1Q8N9F7 314 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 METTL21AQ8WXB1 218 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 KLHL6Q8WZ60 621 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 ZNF285Q96NJ3 590 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 FCRL4Q96PJ5 515 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 MTG2Q9H4K7 406 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 XKR8Q9H6D3 395 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 FOLH1BQ9HBA9 442 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 SLC35C2Q9NQQ7 365 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 PCDHGB2Q9Y5G2 931 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 NRAPQ86VF7 1730 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 MITFO75030 526 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 NME6O75414 186 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 GADD45GO95257 159 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 KLF8O95600 359 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 GPX3P22352 226 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 ACRV1P26436 265 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 ADARB1P78563 741 aaKnown RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 GALNT1Q10472 559 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 CBLBQ13191 982 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 KEAP1Q14145 624 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 ADPRMQ3LIE5 342 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 IDNKQ5T6J7 187 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 ERN2Q76MJ5 926 aaKnown RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 ZNF248Q8NDW4 579 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 SMPDL3AQ92484 453 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 RGMAQ96B86 450 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 SLC29A3Q9BZD2 475 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 MYO9BQ13459 2157 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 TRIM3O75382 744 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 ALPLP05186 524 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 NUDT1P36639 197 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 BMPR1AP36894 532 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 HSD17B2P37059 387 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 AVPR1BP47901 424 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 P2RX3P56373 397 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 BTN3A2P78410 334 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 SWI5Q1ZZU3 235 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 Q8N402 240 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 YIPF7Q8N8F6 280 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 MS4A12Q9NXJ0 267 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 HCN3Q9P1Z3 774 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 HCN2Q9UL51 889 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 H7C0S8 307 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 TIMP1P01033 207 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 PDGFAP04085 211 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 CFIP05156 583 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 EBLN1P0CF75 366 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 DHPSP49366 369 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 PPP3R1P63098 170 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 UNC50Q53HI1 259 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 SPIN4Q56A73 249 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 C10orf62Q5T681 223 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 FBXO46Q6PJ61 603 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 SH2D5Q6ZV89 423 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 LGI4Q8N135 537 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 SLC5A11Q8WWX8 675 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 TMEM203Q969S6 136 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 OTUB2Q96DC9 234 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 DUS3LQ96G46 650 aaKnown RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 MCCC1Q96RQ3 725 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 MGLLQ99685 303 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 ACOT13Q9NPJ3 140 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 PCDHB16Q9NRJ7 776 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 CD300AQ9UGN4 299 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 MRTO4Q9UKD2 239 aaKnown RBP12.62□□□□□ -0.39
TCOF1-213ENST00000514442 SCN7AQ01118 1682 aa12.62□□□□□ -0.39
TCOF1-213ENST00000514442 STX16O14662 325 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 C8orf89P0DMQ9 161 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 ACSL1P33121 698 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CSTF2P33240 577 aaKnown RBP eCLIP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 KHKP50053 298 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 GDI2P50395 445 aaKnown RBP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 PSMD4P55036 377 aaKnown RBP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 LIN54Q6MZP7 749 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 SHQ1Q6PI26 577 aaKnown RBP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 B3GNT8Q7Z7M8 397 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 LINC00597Q9H2U6 94 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TBC1D17Q9HA65 648 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 GJD2Q9UKL4 321 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CLEC4AQ9UMR7 237 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 A8MUA0 341 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms