RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 FOLR3P41439 243 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 SKP1P63208 163 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 SLC25A3Q00325 362 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ZNF33BQ06732 778 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 STX5Q13190 355 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 LINC00303Q3SY05 128 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 SPATS1Q496A3 300 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 GGTA1PQ4G0N0 100 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 WLSQ5T9L3 541 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ATP1A1-AS1Q5TC04 95 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 LETMD1Q6P1Q0 360 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 MED27Q6P2C8 311 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 C16orf89Q6UX73 402 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 COX15Q7KZN9 410 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ABHD13Q7L211 337 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 GOLGA7Q7Z5G4 137 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 SNX32Q86XE0 403 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 RAB43Q86YS6 212 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 MYLK4Q86YV6 388 aaPredicted RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 DTWD1Q8N5C7 304 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 OR9A4Q8NGU2 314 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 STT3BQ8TCJ2 826 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ADAMTS17Q8TE56 1095 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 WDR60Q8WVS4 1066 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 APOBEC4Q8WW27 367 aaKnown RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 TTC9Q92623 222 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 EXTL1Q92935 676 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ATP6V1E2Q96A05 226 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 SMIM10Q96HG1 83 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ANKRD27Q96NW4 1050 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 UBL7Q96S82 380 aaPredicted RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 ARHGAP9Q9BRR9 750 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 THTPAQ9BU02 230 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 SLC25A23Q9BV35 468 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 TGIF2Q9GZN2 237 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 SLC6A16Q9GZN6 736 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 RHBGQ9H310 441 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 IPPKQ9H8X2 491 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 MKKSQ9NPJ1 570 aaPredicted RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 SEMA4BQ9NPR2 832 aaPredicted RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 TRPC4Q9UBN4 977 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 TRPS1Q9UHF7 1281 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ADGRE2Q9UHX3 823 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 MRPS2Q9Y399 296 aaKnown RBP7.87□□□□□ -1.15
CCL28-204ENST00000514421 MAP4K5Q9Y4K4 846 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 GPR45Q9Y5Y3 372 aa7.87□□□□□ -1.15
CCL28-204ENST00000514421 ZFHX4Q86UP3 3567 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 LOC100653049A0A140TA62 436 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 LRIT2A6NDA9 550 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 SGK494L7N484 410 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 PEX12O00623 359 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 FBP2O00757 339 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 UGDHO60701 494 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 GALR3O60755 368 aaPredicted RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 ENTPD5O75356 428 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 KRT34O76011 436 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 CLDN9O95484 217 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 UMODP07911 640 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 SNRPB2P08579 225 aaKnown RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 SFTPCP11686 197 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 IL1RNP18510 177 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 CD22P20273 847 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 IL10P22301 178 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 MMP11P24347 488 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 SERPINB1P30740 379 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 OTX2P32243 289 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 EMP2P54851 167 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 STXBP1P61764 594 aaKnown RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 ERVK-8P63133 956 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 HYAL2Q12891 473 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 IL10RAQ13651 578 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 KPNB1Q14974 876 aaKnown RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 VWA2Q5GFL6 755 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 PIGGQ5H8A4 983 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 FAM69BQ5VUD6 431 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 NXNQ6DKJ4 435 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 GRHL2Q6ISB3 625 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 AAGABQ6PD74 315 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 TRIM46Q7Z4K8 759 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 LAPTM4BQ86VI4 370 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 FUNDC1Q8IVP5 155 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 LAS2Q8IYD9 372 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 DEFB107AQ8IZN7 70 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 FBXW8Q8N3Y1 598 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 AMER3Q8N944 861 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 L3MBTL4Q8NA19 623 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 SRFBP1Q8NEF9 429 aaKnown RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 OR7G3Q8NG95 312 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 OR52B6Q8NGF0 335 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 OR51Q1Q8NH59 317 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 ZCCHC10Q8TBK6 192 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 UTP15Q8TED0 518 aaKnown RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 JADE3Q92613 823 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 ROPN1LQ96C74 230 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 VPS50Q96JG6 964 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 MAGEB10Q96LZ2 347 aaPredicted RBP7.86□□□□□ -1.15
CCL28-204ENST00000514421 KCNA7Q96RP8 456 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 SPSB2Q99619 263 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 SLC29A3Q9BZD2 475 aa7.86□□□□□ -1.15
CCL28-204ENST00000514421 KLHL31Q9H511 634 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms