RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 PTBP1P26599 531 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 SSTR4P31391 388 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 ETV3P41162 512 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 NBL1P41271 181 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 KRT6CP48668 564 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 B2MP61769 119 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 VLDLRP98155 873 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 BAMBIQ13145 260 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 PRKG2Q13237 762 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 PPA1Q15181 289 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 PTPRNQ16849 979 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 PERM1Q5SV97 790 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 NXNQ6DKJ4 435 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 KIAA1161Q6NSJ0 714 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 TMEM107Q6UX40 140 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 PTGR2Q8N8N7 351 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 GLB1L3Q8NCI6 653 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 OR2AP1Q8NGE2 309 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 ITCHQ96J02 903 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 SPATA9Q9BWV2 254 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 C1QTNF7Q9BXJ2 289 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 DCSTAMPQ9H295 470 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 ITM2CQ9NQX7 267 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 KCNN3Q9UGI6 736 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 RAB23Q9ULC3 237 aa7.08□□□□□ -1.28
CLIP1-205ENST00000514271 EXO1Q9UQ84 846 aaKnown RBP7.08□□□□□ -1.28
CLIP1-205ENST00000514271 CLCA1A8K7I4 914 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 EFCAB9A8MZ26 197 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 K7ESF4 209 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SNPHO15079 494 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PRAMEF4O60810 478 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TYRP1P17643 537 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 RPS3P23396 243 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TEAD1P28347 426 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 AGTR2P50052 363 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SGSHP51688 502 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF235Q14590 738 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PAGE2BQ5JRK9 111 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PRAMEF9Q5VWM5 478 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 LRRC66Q68CR7 880 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 FRMPD2BQ6IN97 320 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PLPP7Q8NBV4 271 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 DENND6BQ8NEG7 585 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CEP76Q8TAP6 659 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 DNAJB14Q8TBM8 379 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 UBE2FQ969M7 185 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 MYEOVQ96EZ4 313 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TIMP4Q99727 224 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 MARVELD1Q9BSK0 173 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 FICDQ9BVA6 458 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 GTPBP2Q9BX10 602 aaKnown RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 FOXQ1Q9C009 403 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 RDH14Q9HBH5 336 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ZFP64Q9NPA5 681 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 KLHL8Q9P2G9 620 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 IL36AQ9UHA7 158 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 C3orf18Q9UK00 162 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CAB39Q9Y376 341 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 BRWD1Q9NSI6 2320 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 C9JVG2 144 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CXCR6O00574 342 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TPST2O60704 377 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 GJB3O75712 270 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 C1QBP02746 253 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SCG5P05408 212 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 GSNP06396 782 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SP9P0CG40 484 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PCSK2P16519 638 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 POLR2CP19387 275 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CBLP22681 906 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SERPINA4P29622 427 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 HOXC12P31275 282 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CDKN2CP42773 168 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SOX9P48436 509 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 GZMKP49863 264 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PCBP3P57721 371 aaKnown RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SLAMF1Q13291 335 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PIN1Q13526 163 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ABRAXAS2Q15018 415 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 AGERQ15109 404 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 IMPG1Q17R60 797 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 BCL7AQ4VC05 210 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 FAM98BQ52LJ0 330 aaKnown RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 MARC1Q5VT66 337 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PEAR1Q5VY43 1037 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ZDHHC20Q5W0Z9 365 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF544Q6NX49 715 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CASC4Q6P4E1 433 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 NAT16Q8N8M0 369 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 MDGA1Q8NFP4 955 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 OR52B6Q8NGF0 335 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TMEM121BQ9BXQ6 578 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 POLR1EQ9GZS1 481 aaKnown RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 C11orf16Q9NQ32 467 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF275Q9NSD4 429 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 MED9Q9NWA0 146 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF624Q9P2J8 865 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 NFKBIL1Q9UBC1 381 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 LYVE1Q9Y5Y7 322 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PIKFYVEQ9Y2I7 2098 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms