RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 G3V3Y1 287 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 RTCAO00442 366 aaKnown RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 CCNT2O60583 730 aaKnown RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 ZNF354AO60765 605 aaPredicted RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 LDB3O75112 727 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 C1QAP02745 245 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 HPDP32754 393 aaPredicted RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 ATP6V0D1P61421 351 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 PPIAP62937 165 aaKnown RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 ID2Q02363 134 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 ILF2Q12905 390 aaKnown RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 CHIT1Q13231 466 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 EFTUD2Q15029 972 aaKnown RBP eCLIP11.33□□□□□ -0.61e-9■■■■■ 35.4
SNHG4-208ENST00000514110 ZKSCAN8Q15776 578 aaPredicted RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 ZNF750Q32MQ0 723 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 HSDL2Q6YN16 418 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 MEX3BQ6ZN04 569 aaKnown RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 GPALPP1Q8IXQ4 340 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 MORN4Q8NDC4 146 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 OR2M7Q8NG81 312 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 OR14A16Q8NHC5 309 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 DAZLQ92904 295 aaKnown RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 EXT2Q93063 718 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 UBXN10Q96LJ8 280 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 RBBP8Q99708 897 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 CPNE1Q99829 537 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 TREX2Q9BQ50 279 aaPredicted RBP11.33□□□□□ -0.6
SNHG4-208ENST00000514110 EFCAB11Q9BUY7 163 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 MS4A8Q9BY19 250 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 OR8D2Q9GZM6 311 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 DPH5Q9H2P9 285 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 GRPEL1Q9HAV7 217 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 SAYSD1Q9NPB0 183 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 COQ3Q9NZJ6 369 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 VTI1BQ9UEU0 232 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 ITGB1BP2Q9UKP3 347 aa11.33□□□□□ -0.6
SNHG4-208ENST00000514110 FAM159BA6NKW6 160 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 FAM166BA8MTA8 275 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 C17orf105B2RV13 164 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 SH3BGRLO75368 114 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 STMN1P16949 149 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 ATP5A1P25705 553 aaKnown RBP11.32□□□□□ -0.6
SNHG4-208ENST00000514110 PAFAH1B1P43034 410 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 MSH2P43246 934 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 HK2P52789 917 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 RAB10P61026 200 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 PLGLB1Q02325 96 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 IRF8Q02556 426 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 TLE4Q04727 773 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 TGM3Q08188 693 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 STX4Q12846 297 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 LAPTM5Q13571 262 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 RCN2Q14257 317 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 TBCCQ15814 346 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 ARHGAP11AQ6P4F7 1023 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 SLC2A12Q8TD20 617 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 ZNF473Q8WTR7 871 aaKnown RBP11.32□□□□□ -0.6
SNHG4-208ENST00000514110 CHTF18Q8WVB6 975 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 CDKL2Q92772 493 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 KIAA1191Q96A73 305 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 ANKRD9Q96BM1 317 aaPredicted RBP11.32□□□□□ -0.6
SNHG4-208ENST00000514110 SCYL1Q96KG9 808 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 KCNC2Q96PR1 638 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 ERP44Q9BS26 406 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 TBCDQ9BTW9 1192 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 TTTY12Q9BZ98 90 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 CD244Q9BZW8 370 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 TP63Q9H3D4 680 aaPredicted RBP11.32□□□□□ -0.6
SNHG4-208ENST00000514110 ZDHHC11Q9H8X9 412 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 LYRM4Q9HD34 91 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 WHRNQ9P202 907 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 TXNDC16Q9P2K2 825 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 RNF6Q9Y252 685 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 LIPGQ9Y5X9 500 aa11.32□□□□□ -0.6
SNHG4-208ENST00000514110 NKX2-6A6NCS4 301 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 SYNDIG1LA6NDD5 238 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 FAM90A27PA6NNH2 459 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 NPIPA2E9PIF3 369 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 NPIPA3F8WFD2 350 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 SAP18O00422 153 aaKnown RBP11.31□□□□□ -0.6
SNHG4-208ENST00000514110 FAM155BO75949 473 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 GLSO94925 669 aaPredicted RBP11.31□□□□□ -0.6
SNHG4-208ENST00000514110 ETHE1O95571 254 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 IGFBP2P18065 325 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 TNNI3P19429 210 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 GP5P40197 560 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 CASP2P42575 452 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 NUP107P57740 925 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 GPX6P59796 221 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 RNF4P78317 190 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 TFF3Q07654 80 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 DLG1Q12959 904 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 E2F2Q14209 437 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 HIST2H2ACQ16777 129 aaPredicted RBP11.31□□□□□ -0.6
SNHG4-208ENST00000514110 PAGE2BQ5JRK9 111 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 HIST2H2AA3Q6FI13 130 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 TMEM211Q6ICI0 200 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 C3orf62Q6ZUJ4 267 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 CYS1Q717R9 158 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms