RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 DFFAO00273 331 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 EEF2KO00418 725 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SYT5O00445 386 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 BTN3A1O00481 513 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ZSCAN9O15535 394 aaPredicted RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 TRIAP1O43715 76 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SMC2O95347 1197 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 WDPCPO95876 746 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 GRPP07492 148 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ST6GAL1P15907 406 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ERCC2P18074 760 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 POLR2CP19387 275 aaPredicted RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 HLA-DPA1P20036 260 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 CXCR2P25025 360 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 PON1P27169 355 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SERPINB3P29508 390 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 EEF1DP29692 281 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 NSG1P42857 185 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 GABRA4P48169 554 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC13A2Q13183 592 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 XRCC4Q13426 336 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 OLIG2Q13516 323 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 GALNT3Q14435 633 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 IQCB1Q15051 598 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 EXOC3L4Q17RC7 722 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 RAB6CQ53S08 254 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF766Q5HY98 468 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 UBAP2Q5T6F2 1119 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ERMARDQ5T6L9 678 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 TEDDM1Q5T9Z0 273 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ZDHHC20Q5W0Z9 365 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SFRP4Q6FHJ7 346 aaPredicted RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 HMBOX1Q6NT76 420 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 H3F3CQ6NXT2 135 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ARSKQ6UWY0 536 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 CDHR3Q6ZTQ4 885 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 RFX8Q6ZV50 586 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 HOOK3Q86VS8 718 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 CNGA4Q8IV77 575 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 PGBD5Q8N414 524 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 TTC30BQ8N4P2 665 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 HORMAD2Q8N7B1 307 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 TMEM178AQ8NBL3 297 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ACVR1CQ8NER5 493 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 OR4E2Q8NGC2 313 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 FAM57AQ8TBR7 257 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC20A1Q8WUM9 679 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 CELF6Q96J87 481 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF354BQ96LW1 612 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 PIP5K1AQ99755 562 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 TRIM51Q9BSJ1 452 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 TUBGCP2Q9BSJ2 902 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 CCM2Q9BSQ5 444 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 CNPY3Q9BT09 278 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 TRMOQ9BU70 441 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 TDRD1Q9BXT4 1180 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 AMBRA1Q9C0C7 1298 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 RAB6CQ9H0N0 254 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 TP63Q9H3D4 680 aaPredicted RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SRMSQ9H3Y6 488 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 PCDH9Q9HC56 1237 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 MAGEE1Q9HCI5 957 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SERHLQ9NQF3 203 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC22A11Q9NSA0 550 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 IMP3Q9NV31 184 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ETAA1Q9NY74 926 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 DHCR7Q9UBM7 475 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 DNAJC12Q9UKB3 198 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 PROCRQ9UNN8 238 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 PLCL2Q9UPR0 1127 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 ICKQ9UPZ9 632 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 SHOC2Q9UQ13 582 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 RNF6Q9Y252 685 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 PLEKHA6Q9Y2H5 1048 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 L3MBTL1Q9Y468 752 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.44□□□□□ -1.862e-8■■■■□ 25.8
PDLIM5-218ENST00000513341 SONP18583 2426 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 NOTCH3Q9UM47 2321 aa3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 PHF3Q92576 2039 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-218ENST00000513341 A0A087WWL8 130 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 A0A1B0GX78 115 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 NKX2-6A6NCS4 301 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 MGAT4DA6NG13 374 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 A6NNC1 897 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 INAFM1C9JVW0 142 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 NPIPA5E9PKD4 350 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 GTPBP1O00178 669 aaKnown RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 BTN3A3O00478 584 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 CES2O00748 559 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 MAP2K7O14733 419 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 DSCR3O14972 297 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 SRPX2O60687 465 aaPredicted RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 WISP2O76076 250 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 INMTO95050 263 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 CALB1P05937 261 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 TPOP07202 933 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 ATP1A3P13637 1013 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 ITGALP20701 1170 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 ZFP36L2P47974 494 aaKnown RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 CD151P48509 253 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms