RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 GIMAP5Q96F15 307 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 VMP1Q96GC9 406 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 MAGED4Q96JG8 741 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 LAT2Q9GZY6 243 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 POLR3FQ9H1D9 316 aaPredicted RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 FZD8Q9H461 694 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 ST6GALNAC4Q9H4F1 302 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 COPS7BQ9H9Q2 264 aaPredicted RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 ARGLU1Q9NWB6 273 aaPredicted RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 TMEM161AQ9NX61 479 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 DDX43Q9NXZ2 648 aaKnown RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 SPG21Q9NZD8 308 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 OR6C2Q9NZP2 312 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 SLC12A6Q9UHW9 1150 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 ACAD8Q9UKU7 415 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 ITGA11Q9UKX5 1188 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 GRID1Q9ULK0 1009 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 BAZ2BQ9UIF8 2168 aaKnown RBP3.82□□□□□ -1.8
HTT-210ENST00000512909 MCM3APO60318 1980 aa3.82□□□□□ -1.8
HTT-210ENST00000512909 NID2Q14112 1375 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 ADGRA3Q8IWK6 1321 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 E9PMD0 336 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 K7ERI5 159 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 PTGESO14684 152 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 ZNF197O14709 1029 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 TNRC18O15417 2968 aaPredicted RBP3.81□□□□□ -1.8
HTT-210ENST00000512909 LINC01565O15544 149 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 EXTL3O43909 919 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 STBD1O95210 358 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 GSRP00390 522 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 CSN3P07498 182 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 LHCGRP22888 699 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 WNT5AP41221 380 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 OR1G1P47890 313 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 UBASH3AP57075 661 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 OSTNP61366 133 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 MAT1AQ00266 395 aaKnown RBP3.81□□□□□ -1.8
HTT-210ENST00000512909 SULT2A1Q06520 285 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 TRAP1Q12931 704 aaKnown RBP3.81□□□□□ -1.8
HTT-210ENST00000512909 SGCGQ13326 291 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 SCARB2Q14108 478 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 FAM174BQ3ZCQ3 159 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 TRAT1Q6PIZ9 186 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 DCLRE1AQ6PJP8 1040 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 ZNF410Q86VK4 478 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 HOOK3Q86VS8 718 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 ZBTB8OSQ8IWT0 167 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 TMEM178AQ8NBL3 297 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 ZNF248Q8NDW4 579 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 OR52N5Q8NH56 324 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 GRHL3Q8TE85 626 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 HEXDCQ8WVB3 486 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 PYCR2Q96C36 320 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 ZNF689Q96CS4 500 aaPredicted RBP3.81□□□□□ -1.8
HTT-210ENST00000512909 RPGRIP1Q96KN7 1286 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 MBOAT7Q96N66 472 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 CASD1Q96PB1 797 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 DUX3Q96PT4 197 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 MTMR9Q96QG7 549 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 HSD17B14Q9BPX1 270 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 TMEM117Q9H0C3 514 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 UBE2ZQ9H832 354 aaPredicted RBP3.81□□□□□ -1.8
HTT-210ENST00000512909 TUFT1Q9NNX1 390 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 KCNMB3Q9NPA1 279 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 SLC52A3Q9NQ40 469 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 SDR39U1Q9NRG7 319 aaPredicted RBP3.81□□□□□ -1.8
HTT-210ENST00000512909 DDX19AQ9NUU7 478 aaKnown RBP3.81□□□□□ -1.8
HTT-210ENST00000512909 VPS18Q9P253 973 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 ZNF624Q9P2J8 865 aaPredicted RBP3.81□□□□□ -1.8
HTT-210ENST00000512909 WRAP73Q9P2S5 460 aaPredicted RBP3.81□□□□□ -1.8
HTT-210ENST00000512909 MAN1B1Q9UKM7 699 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 WDR83OSQ9Y284 106 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 HES2Q9Y543 173 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 R4GN57 208 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 ALPK3Q96L96 1907 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 LAMA4Q16363 1823 aa3.81□□□□□ -1.8
HTT-210ENST00000512909 PP2D1A8MPX8 630 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 CDC123O75794 336 aaPredicted RBP3.8□□□□□ -1.8
HTT-210ENST00000512909 EML2O95834 649 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 ITGB6P18564 788 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 CYP11B2P19099 503 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 GLRA2P23416 452 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 DNAJB1P25685 340 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 RPA1P27694 616 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 MARCKSP29966 332 aaPredicted RBP3.8□□□□□ -1.8
HTT-210ENST00000512909 ALDH4A1P30038 563 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 ATP5DP30049 168 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 CDKN1AP38936 164 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 MAGEA11P43364 429 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 RGS7P49802 495 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 VAMP7P51809 220 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 ARPP19P56211 112 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 PEX3P56589 373 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 SNRPD1P62314 119 aaKnown RBP3.8□□□□□ -1.8
HTT-210ENST00000512909 ROR1Q01973 937 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 TAF10Q12962 218 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 SQLEQ14534 574 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 PDIA5Q14554 519 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 OPCMLQ14982 345 aa3.8□□□□□ -1.8
HTT-210ENST00000512909 MAPK6Q16659 721 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms