RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SDCCAG3Q96C92 435 aa13.67□□□□□ -0.22
CCHCR1-229ENST00000512418 F2RL3Q96RI0 385 aa13.67□□□□□ -0.22
CCHCR1-229ENST00000512418 ERP44Q9BS26 406 aa13.67□□□□□ -0.22
CCHCR1-229ENST00000512418 DPH5Q9H2P9 285 aa13.67□□□□□ -0.22
CCHCR1-229ENST00000512418 PRDM7Q9NQW5 492 aa13.67□□□□□ -0.22
CCHCR1-229ENST00000512418 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
CCHCR1-229ENST00000512418 VTI1BQ9UEU0 232 aa13.67□□□□□ -0.22
CCHCR1-229ENST00000512418 RNF112Q9ULX5 631 aa13.67□□□□□ -0.22
CCHCR1-229ENST00000512418 FANCGO15287 622 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 CCNT2O60583 730 aaKnown RBP13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 GSTA2P09210 222 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 EPORP19235 508 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 SPRP35270 261 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 CASP2P42575 452 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 MSH2P43246 934 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 KIR3DL1P43629 444 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 MRPS25P82663 173 aaKnown RBP13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 CHIT1Q13231 466 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 E2F2Q14209 437 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 C16orf47Q6ZP98 133 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 C3orf62Q6ZUJ4 267 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 CTAGE3PQ8IX95 158 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 OR8K3Q8NH51 312 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 ZNF473Q8WTR7 871 aaKnown RBP13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 PTPMT1Q8WUK0 201 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 EXT2Q93063 718 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 UBE2E3Q969T4 207 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 C14orf79Q96F83 325 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 RASL10BQ96S79 203 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 SPOCK3Q9BQ16 436 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 TBCDQ9BTW9 1192 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 ALOXE3Q9BYJ1 711 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 CD244Q9BZW8 370 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 LIN28AQ9H9Z2 209 aaKnown RBP13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 DEPPQ9NTK1 212 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 SPACA6W5XKT8 324 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 TACC2O95359 2948 aa13.66□□□□□ -0.22
CCHCR1-229ENST00000512418 ACOT7O00154 380 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 WWP2O00308 870 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 OR6B1O95007 311 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 SCELO95171 688 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 C1QAP02745 245 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 HIST1H1TP22492 207 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 ATP5A1P25705 553 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 SERPINB1P30740 379 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 SOX3P41225 446 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 HK2P52789 917 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 TMEM35AQ53FP2 167 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 GRTP1Q5TC63 336 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 TMEM211Q6ICI0 200 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 PAOXQ6QHF9 649 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 IL20RBQ6UXL0 311 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 ZNF793Q6ZN11 406 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 UBE3DQ7Z6J8 389 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 ACOT4Q8N9L9 421 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 ACBD4Q8NC06 268 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 C7orf57Q8NEG2 295 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 SPATA4Q8NEY3 305 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 OR2M7Q8NG81 312 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 OR52N2Q8NGI0 321 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 STAG3L4Q8TBR4 150 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 MAPKAP1Q9BPZ7 522 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 MS4A8Q9BY19 250 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 PHACTR1Q9C0D0 580 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 OR8D2Q9GZM6 311 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 TP63Q9H3D4 680 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 ALG9Q9H6U8 611 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 PRM3Q9NNZ6 103 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 GRHL1Q9NZI5 618 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 NUDT4Q9NZJ9 180 aa13.65□□□□□ -0.22
CCHCR1-229ENST00000512418 C17orf105B2RV13 164 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 RAD51CO43502 376 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 LDB3O75112 727 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 SLC35E2BP0CK96 405 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 TNNI3P19429 210 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 SSR2P43308 183 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 GPX6P59796 221 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 RNF4P78317 190 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 PLGLB1Q02325 96 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 SLMAPQ14BN4 828 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 KBTBD12Q3ZCT8 623 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 MED27Q6P2C8 311 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 RGS9BPQ6ZS82 235 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 GK5Q6ZS86 529 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 RAPH1Q70E73 1250 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 CHSY3Q70JA7 882 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 TBC1D1Q86TI0 1168 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 ISCA2Q86U28 154 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 LAS2Q8IYD9 372 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 MARVELD2Q8N4S9 558 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 GOLM1Q8NBJ4 401 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 OR5L2Q8NGL0 311 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 SLC2A12Q8TD20 617 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 UBTD2Q8WUN7 234 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 ASB5Q8WWX0 329 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 ENKD1Q9H0I2 346 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 ZDHHC11Q9H8X9 412 aa13.64□□□□□ -0.23
CCHCR1-229ENST00000512418 MYOCOSA0A1B0GUC4 107 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 PINLYPA6NC86 204 aa13.63□□□□□ -0.23
CCHCR1-229ENST00000512418 FAM166BA8MTA8 275 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms