RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 OR4C11Q6IEV9 310 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 RPUSD3Q6P087 351 aaKnown RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 C16orf47Q6ZP98 133 aaPredicted RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 RPS19BP1Q86WX3 136 aaKnown RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 OR4N5Q8IXE1 308 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 ZNF595Q8IYB9 648 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 BCORP1Q8N888 145 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 ZNF321PQ8N8H1 164 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 APCDD1LQ8NCL9 501 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 DOK4Q8TEW6 326 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 NCLNQ969V3 563 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 ATP6V1E2Q96A05 226 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 MRPL57Q9BQC6 102 aaKnown RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 UTP23Q9BRU9 249 aaKnown RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 MRPL46Q9H2W6 279 aaKnown RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 L2HGDHQ9H9P8 463 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 LIN28AQ9H9Z2 209 aaKnown RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 LYRM4Q9HD34 91 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 OLAHQ9NV23 265 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 MRPS33Q9Y291 106 aaKnown RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 PCDHGA11Q9Y5H2 935 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 LRRK2Q5S007 2527 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 ICE1Q9Y2F5 2266 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 WASHC1A8K0Z3 465 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 H0YIV9 168 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 STX16-NPEPL1H3BU86 382 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 STX16O14662 325 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 FGF17O60258 216 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 PRKNO60260 465 aaPredicted RBP12.4□□□□□ -0.42
RNF4-215ENST00000511843 CLDN9O95484 217 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 GBAP04062 536 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 CPN2P22792 545 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 MST1P26927 711 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 SERPINB1P30740 379 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 PIK3CBP42338 1070 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 CDH13P55290 713 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 KCNK10P57789 538 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 ELOAQ14241 798 aaKnown RBP12.4□□□□□ -0.42
RNF4-215ENST00000511843 SGO1Q5FBB7 561 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 C18orf63Q68DL7 685 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 ZNF324BQ6AW86 544 aaPredicted RBP12.4□□□□□ -0.42
RNF4-215ENST00000511843 HIST2H2BCQ6DN03 193 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 L3MBTL4Q8NA19 623 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 ST6GALNAC3Q8NDV1 305 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 SRFBP1Q8NEF9 429 aaKnown RBP12.4□□□□□ -0.42
RNF4-215ENST00000511843 B3GNT7Q8NFL0 401 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 SUN3Q8TAQ9 357 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 WDR20Q8TBZ3 569 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 ADAMTS18Q8TE60 1221 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 UCN3Q969E3 161 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 RGMAQ96B86 450 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 ANKRD9Q96BM1 317 aaPredicted RBP12.4□□□□□ -0.42
RNF4-215ENST00000511843 SLX1AQ9BQ83 275 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 ZNF717Q9BY31 904 aaPredicted RBP12.4□□□□□ -0.42
RNF4-215ENST00000511843 ALOXE3Q9BYJ1 711 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 DEFB126Q9BYW3 111 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 ROGDIQ9GZN7 287 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 ADAP2Q9NPF8 381 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 FARSBQ9NSD9 589 aaKnown RBP12.4□□□□□ -0.42
RNF4-215ENST00000511843 ABI3Q9P2A4 366 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 ERRFI1Q9UJM3 462 aaPredicted RBP12.4□□□□□ -0.42
RNF4-215ENST00000511843 ATG4BQ9Y4P1 393 aa12.4□□□□□ -0.42
RNF4-215ENST00000511843 A0A1W2PPM1 405 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 ARHGAP10A1A4S6 786 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 GLOD5A6NK44 160 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 SMIM23A6NLE4 172 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 TMPRSS11DO60235 418 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 UGDHO60701 494 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 CTNSO60931 367 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 NEURL1O76050 574 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 SCELO95171 688 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 RASAL1O95294 804 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 RPS17P08708 135 aaKnown RBP12.39□□□□□ -0.43
RNF4-215ENST00000511843 BSGP35613 385 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 SLCO1A2P46721 670 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 CLCN2P51788 898 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 TDGF1P3P51864 188 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 MLF1P58340 268 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 STX4Q12846 297 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 LGSNQ5TDP6 509 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 LETMD1Q6P1Q0 360 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 TIFABQ6ZNK6 161 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 OR4F6Q8NGB9 312 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 ZNF483Q8TF39 744 aaPredicted RBP12.39□□□□□ -0.43
RNF4-215ENST00000511843 UBLCP1Q8WVY7 318 aaPredicted RBP12.39□□□□□ -0.43
RNF4-215ENST00000511843 NR4A3Q92570 626 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 REPS1Q96D71 796 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 TSPAN10Q9H1Z9 355 aaPredicted RBP12.39□□□□□ -0.43
RNF4-215ENST00000511843 LRFN1Q9P244 771 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 PSMC3IPQ9P2W1 217 aaPredicted RBP12.39□□□□□ -0.43
RNF4-215ENST00000511843 ADGRE2Q9UHX3 823 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 OSGIN2Q9Y236 505 aa12.39□□□□□ -0.43
RNF4-215ENST00000511843 DIDO1Q9BTC0 2240 aaKnown RBP12.39□□□□□ -0.43
RNF4-215ENST00000511843 A1L4Q6 167 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 DLX3O60479 287 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 PYGBP11216 843 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 EDN3P14138 238 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 PTX3P26022 381 aaPredicted RBP12.38□□□□□ -0.43
RNF4-215ENST00000511843 GPR143P51810 404 aa12.38□□□□□ -0.43
RNF4-215ENST00000511843 PHEXP78562 749 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms