RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 GPR34Q9UPC5 381 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 HBS1LQ9Y450 684 aaKnown RBP5.87□□□□□ -1.47
USP53-206ENST00000510737 LSM4Q9Y4Z0 139 aaKnown RBP5.87□□□□□ -1.47
USP53-206ENST00000510737 IRAK2O43187 625 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 ACSL4O60488 711 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 TBCAO75347 108 aaKnown RBP5.86□□□□□ -1.47
USP53-206ENST00000510737 CPNE6O95741 557 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 HEXAP06865 529 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 DLATP10515 647 aaKnown RBP5.86□□□□□ -1.47
USP53-206ENST00000510737 ZNF18P17022 549 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 TNNI1P19237 187 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 CD1CP29017 333 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 NNMTP40261 264 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 OR1D5P58170 312 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 RPS21P63220 83 aaKnown RBP5.86□□□□□ -1.47
USP53-206ENST00000510737 DLG2Q15700 870 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 DCAF12Q5T6F0 453 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 PM20D1Q6GTS8 502 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 SLC35E4Q6ICL7 350 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 SCARA5Q6ZMJ2 495 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 LINGO2Q7L985 606 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 BMPERQ8N8U9 685 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 ZNF557Q8N988 423 aaPredicted RBP5.86□□□□□ -1.47
USP53-206ENST00000510737 ADAD2Q8NCV1 583 aaKnown RBP5.86□□□□□ -1.47
USP53-206ENST00000510737 TSACCQ96A04 125 aaPredicted RBP5.86□□□□□ -1.47
USP53-206ENST00000510737 CENPTQ96BT3 561 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 ZNF599Q96NL3 588 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 CTRCQ99895 268 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 DUSP16Q9BY84 665 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 FGFBP2Q9BYJ0 223 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 EDEM3Q9BZQ6 932 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 NOD2Q9HC29 1040 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 EXOC7Q9UPT5 735 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 DLGAP4Q9Y2H0 992 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 KCNK7Q9Y2U2 307 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 SMAD5-AS1Q9Y6J3 95 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 NBEAL1Q6ZS30 2694 aa5.86□□□□□ -1.47
USP53-206ENST00000510737 CTAGE9A4FU28 777 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 GOLGA6L9A6NEM1 432 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 TMEM202A6NGA9 273 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 ZSCAN5CA6NGD5 496 aaPredicted RBP5.85□□□□□ -1.47
USP53-206ENST00000510737 IGLON5A6NGN9 336 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 B4E171 279 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 KPNA3O00505 521 aaPredicted RBP5.85□□□□□ -1.47
USP53-206ENST00000510737 ALOX15BO15296 676 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 MOCS3O95396 460 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 IGLV3-27P01718 113 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 CTAGE8P0CG41 777 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 CD1EP15812 388 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 HNRNPH3P31942 346 aaKnown RBP5.85□□□□□ -1.47
USP53-206ENST00000510737 CHRNA3P32297 505 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 TSPAN7P41732 249 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 LIMK2P53671 638 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 PPARDQ03181 441 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 TRPC3Q13507 836 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 CDH18Q13634 790 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 ELOCQ15369 112 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 BMP2KLQ5H9B9 411 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 MS4A13Q5J8X5 152 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 RAB41Q5JT25 222 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 SIRPB2Q5JXA9 342 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 PDSS1Q5T2R2 415 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 KCTD16Q68DU8 428 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 ERN2Q76MJ5 926 aaKnown RBP5.85□□□□□ -1.47
USP53-206ENST00000510737 UNC93AQ86WB7 457 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 CTAGE4Q8IX94 777 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 SYCP3Q8IZU3 236 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 ARHGAP18Q8N392 663 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 HJURPQ8NCD3 748 aaPredicted RBP5.85□□□□□ -1.47
USP53-206ENST00000510737 RAD54LQ92698 747 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 SYAP1Q96A49 352 aaPredicted RBP5.85□□□□□ -1.47
USP53-206ENST00000510737 AZIN2Q96A70 460 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 CCDC127Q96BQ5 260 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 ELP4Q96EB1 424 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 BARD1Q99728 777 aaKnown RBP5.85□□□□□ -1.47
USP53-206ENST00000510737 HEMGNQ9BXL5 484 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 FBXO9Q9UK97 447 aaPredicted RBP5.85□□□□□ -1.47
USP53-206ENST00000510737 TMEM184BQ9Y519 407 aaPredicted RBP5.85□□□□□ -1.47
USP53-206ENST00000510737 FADS3Q9Y5Q0 445 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 MYH11P35749 1972 aa5.85□□□□□ -1.47
USP53-206ENST00000510737 STAB1Q9NY15 2570 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 TNRC6AQ8NDV7 1962 aaKnown RBP5.84□□□□□ -1.47
USP53-206ENST00000510737 KRTAP16-1A8MUX0 517 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 NUDT21O43809 227 aaKnown RBP5.84□□□□□ -1.47
USP53-206ENST00000510737 STK17BO94768 372 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 GCNT3O95395 438 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 ALPIP09923 528 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 CTSEP14091 401 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 PDGFRAP16234 1089 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 CAPN3P20807 821 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 NFKBIAP25963 317 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 CSTF2P33240 577 aaKnown RBP eCLIP5.84□□□□□ -1.47
USP53-206ENST00000510737 DLSTP36957 453 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 CCL11P51671 97 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 THOP1P52888 689 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 PLK1P53350 603 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 GNB1P62873 340 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 TBL3Q12788 808 aaKnown RBP5.84□□□□□ -1.47
USP53-206ENST00000510737 CHAF1BQ13112 559 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 SGCGQ13326 291 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms