RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 SHANK1Q9Y566 2161 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 A8MUI8 341 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 FOXE1O00358 373 aaPredicted RBP22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 SH3BGRLO75368 114 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 OR4F21O95013 312 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 SCELO95171 688 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 CERS1P27544 350 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 UQCRFS1P47985 274 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 NEK2P51955 445 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 NAGLUP54802 743 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 PHEXP78562 749 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 TGM3Q08188 693 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 C10orf62Q5T681 223 aaPredicted RBP22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 DEPDC1Q5TB30 811 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 FHL5Q5TD97 284 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 PAPD4Q6PIY7 484 aaKnown RBP22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 ZNF793Q6ZN11 406 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 FRMD7Q6ZUT3 714 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 GPRIN3Q6ZVF9 776 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 CHSY3Q70JA7 882 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 EXOC3L1Q86VI1 746 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 C10orf107Q8IVU9 208 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 CCNYL1Q8N7R7 359 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 CATSPER1Q8NEC5 780 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 SRFBP1Q8NEF9 429 aaKnown RBP22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 MYRIPQ8NFW9 859 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 OR1N1Q8NGS0 311 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 SSU72Q9NP77 194 aaKnown RBP22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 PSD3Q9NYI0 1048 aa22.28■■□□□ 1.16
ATP2C1-217ENST00000509662 CLEC18AA5D8T8 446 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 RTCAO00442 366 aaKnown RBP22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 ETHE1O95571 254 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 MTTPP55157 894 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 NAA20P61599 178 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 CASP8Q14790 479 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 CLEC18BQ6UXF7 455 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 QSOX2Q6ZRP7 698 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 CLEC18CQ8NCF0 446 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 AGAP11Q8TF27 550 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 TSLPQ969D9 159 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 ZNF354BQ96LW1 612 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 SERINC2Q96SA4 455 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 TBCDQ9BTW9 1192 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 RNF32Q9H0A6 362 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.27■■□□□ 1.167e-6■■■■□ 19.6
ATP2C1-217ENST00000509662 CENPHQ9H3R5 247 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 KCNK13Q9HB14 408 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 PLA2G3Q9NZ20 509 aa22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 SETXQ7Z333 2677 aaKnown RBP22.27■■□□□ 1.16
ATP2C1-217ENST00000509662 SCN2AQ99250 2005 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 TRAV17A0A0B4J275 112 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 SAP18O00422 153 aaKnown RBP22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 PLPP1O14494 284 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 UBFD1O14562 309 aaKnown RBP22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 B3GALT2O43825 422 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 ETV4P43268 484 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 PKNOX1P55347 436 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 ZNF33BQ06732 778 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 IFT88Q13099 833 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 RUNX2Q13950 521 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 ELOAQ14241 798 aaKnown RBP22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 TTC19Q6DKK2 380 aaPredicted RBP22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 RPUSD3Q6P087 351 aaKnown RBP22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 CDYL2Q8N8U2 506 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 SUN3Q8TAQ9 357 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 BARD1Q99728 777 aaKnown RBP22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 ZNF717Q9BY31 904 aaPredicted RBP22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 ROGDIQ9GZN7 287 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 ELOVL6Q9H5J4 265 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 COPS7BQ9H9Q2 264 aaPredicted RBP22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 MMP25Q9NPA2 562 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 PRDM9Q9NQV7 894 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 ACTL7BQ9Y614 415 aa22.26■■□□□ 1.15
ATP2C1-217ENST00000509662 ESRRBO95718 433 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 H2AFXP16104 143 aaPredicted RBP22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 HIST1H1TP22492 207 aaPredicted RBP22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 ATP5A1P25705 553 aaKnown RBP22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 PTX3P26022 381 aaPredicted RBP22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 ALDH3A1P30838 453 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 TNFSF10P50591 281 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 ARFIP1P53367 373 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 CUL3Q13618 768 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 NR6A1Q15406 480 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 TCHHL1Q5QJ38 904 aaPredicted RBP22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 H3F3CQ6NXT2 135 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 ADAMTS18Q8TE60 1221 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 MECRQ9BV79 373 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 GATA5Q9BWX5 397 aaPredicted RBP22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 SORBS1Q9BX66 1292 aaKnown RBP22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 FARSBQ9NSD9 589 aaKnown RBP22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 ABI3Q9P2A4 366 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 SNX6Q9UNH7 406 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 ESPL1Q14674 2120 aa22.25■■□□□ 1.15
ATP2C1-217ENST00000509662 FAM227AF5H4B4 570 aa22.24■■□□□ 1.15
ATP2C1-217ENST00000509662 CLDN4O14493 209 aa22.24■■□□□ 1.15
ATP2C1-217ENST00000509662 TRIM13O60858 407 aa22.24■■□□□ 1.15
ATP2C1-217ENST00000509662 SEMA3DO95025 777 aa22.24■■□□□ 1.15
ATP2C1-217ENST00000509662 CBX6O95503 412 aa22.24■■□□□ 1.15
ATP2C1-217ENST00000509662 WDPCPO95876 746 aa22.24■■□□□ 1.15
ATP2C1-217ENST00000509662 MYZAPP0CAP1 466 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms