RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TUBB4AP04350 444 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 TFEBP19484 476 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 CD22P20273 847 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 PLTPP55058 493 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 GPX6P59796 221 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 C2orf54Q08AI8 447 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 SLMAPQ14BN4 828 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 CDSNQ15517 529 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 AP5B1Q2VPB7 878 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 PAOXQ6QHF9 649 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 CHSY3Q70JA7 882 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 FGD2Q7Z6J4 655 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 TBC1D1Q86TI0 1168 aaPredicted RBP14.31□□□□□ -0.12
TPM3-219ENST00000509409 CD163Q86VB7 1156 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 CHERPQ8IWX8 916 aaKnown RBP14.31□□□□□ -0.12
TPM3-219ENST00000509409 GPALPP1Q8IXQ4 340 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 MORN4Q8NDC4 146 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 C16orf52Q8NHV5 167 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 FAM57AQ8TBR7 257 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 CA5BP1Q8WTZ4 195 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 SDCCAG3Q96C92 435 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 WDR34Q96EX3 536 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 UBXN10Q96LJ8 280 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 MAPKAP1Q9BPZ7 522 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 TBCDQ9BTW9 1192 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 PHACTR1Q9C0D0 580 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 OR8D2Q9GZM6 311 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 DEFB127Q9H1M4 99 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 NMRAL1Q9HBL8 299 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 LYRM4Q9HD34 91 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 MYOTQ9UBF9 498 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 VTI1BQ9UEU0 232 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 CLDN16Q9Y5I7 305 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 C17orf105B2RV13 164 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 C19orf84I3L1E1 186 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 RTCAO00442 366 aaKnown RBP14.3□□□□□ -0.12
TPM3-219ENST00000509409 LDB3O75112 727 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 CPN2P22792 545 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 ATP5A1P25705 553 aaKnown RBP14.3□□□□□ -0.12
TPM3-219ENST00000509409 CRABP2P29373 138 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 CASQ1P31415 396 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 GMPRP36959 345 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 PPIAP62937 165 aaKnown RBP14.3□□□□□ -0.12
TPM3-219ENST00000509409 ID2Q02363 134 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 SERTAD2Q14140 314 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 ZKSCAN8Q15776 578 aaPredicted RBP14.3□□□□□ -0.12
TPM3-219ENST00000509409 TBCCQ15814 346 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 KBTBD12Q3ZCT8 623 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 CMPK2Q5EBM0 449 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 TMEM211Q6ICI0 200 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 MED27Q6P2C8 311 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 CEP128Q6ZU80 1094 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 LRRC70Q7Z2Q7 622 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 CMC1Q7Z7K0 106 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 ACOT4Q8N9L9 421 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 PSD4Q8NDX1 1056 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 OR52N2Q8NGI0 321 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 OR5L2Q8NGL0 311 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 OR14A16Q8NHC5 309 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 FBF1Q8TES7 1133 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 PHF10Q8WUB8 498 aaKnown RBP14.3□□□□□ -0.12
TPM3-219ENST00000509409 PTPMT1Q8WUK0 201 aaPredicted RBP14.3□□□□□ -0.12
TPM3-219ENST00000509409 GRHL1Q9NZI5 618 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 NUDT4Q9NZJ9 180 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 OPTCQ9UBM4 332 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 ANGPTL3Q9Y5C1 460 aa14.3□□□□□ -0.12
TPM3-219ENST00000509409 TMEM200CA6NKL6 621 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 FAM166BA8MTA8 275 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 UBXN8O00124 270 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 SAP18O00422 153 aaKnown RBP14.29□□□□□ -0.12
TPM3-219ENST00000509409 ADAM10O14672 748 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 OR6B1O95007 311 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 LTA4HP09960 611 aaKnown RBP14.29□□□□□ -0.12
TPM3-219ENST00000509409 SOX3P41225 446 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 CASP2P42575 452 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 SSR2P43308 183 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 MAGEA4P43358 317 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 KIR3DL1P43629 444 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 CAV1Q03135 178 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 DDX39BQ13838 428 aaKnown RBP14.29□□□□□ -0.12
TPM3-219ENST00000509409 ZNF750Q32MQ0 723 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 TMEM35AQ53FP2 167 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 ZNF793Q6ZN11 406 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 UBE3DQ7Z6J8 389 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 ISCA2Q86U28 154 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 ZFP62Q8NB50 900 aaPredicted RBP14.29□□□□□ -0.12
TPM3-219ENST00000509409 ZNF473Q8WTR7 871 aaKnown RBP14.29□□□□□ -0.12
TPM3-219ENST00000509409 CMTM7Q96FZ5 175 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 LURAP1Q96LR2 239 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 RASL10BQ96S79 203 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 DMRTA2Q96SC8 542 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 MS4A8Q9BY19 250 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 CSMD1Q96PZ7 3565 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 PCNX1Q96RV3 2341 aa14.29□□□□□ -0.12
TPM3-219ENST00000509409 G3V3Y1 287 aa14.28□□□□□ -0.12
TPM3-219ENST00000509409 K7EPI3 171 aa14.28□□□□□ -0.12
TPM3-219ENST00000509409 ACOT7O00154 380 aa14.28□□□□□ -0.12
TPM3-219ENST00000509409 FANCGO15287 622 aa14.28□□□□□ -0.12
TPM3-219ENST00000509409 COX7A2P14406 83 aa14.28□□□□□ -0.12
TPM3-219ENST00000509409 EPORP19235 508 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms