RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 UBXN6Q9BZV1 441 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SLCO5A1Q9H2Y9 848 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 BCAS3Q9H6U6 928 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 MRPL47Q9HD33 250 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 G6PC2Q9NQR9 355 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 C1GALT1Q9NS00 363 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FBXO34Q9NWN3 711 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 BCLAF3A2AJT9 711 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SERPINE3A8MV23 424 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 BTNL10A8MVZ5 291 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 RNF223E7ERA6 249 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FBP2O00757 339 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PRRG2O14669 202 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 GTF2H1P32780 548 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 BMP8BP34820 402 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CASP3P42574 277 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FLT3LGP49771 235 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 UCP2P55851 309 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 MRPL49Q13405 166 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 RBBP7Q16576 425 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SGCBQ16585 318 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ST3GAL2Q16842 350 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF766Q5HY98 468 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ATAD3CQ5T2N8 411 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ARMCX5Q6P1M9 558 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FAM151BQ6UXP7 276 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 DPPA2Q7Z7J5 298 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 LINC00523Q86TU6 105 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SKA3Q8IX90 412 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PYROXD2Q8N2H3 581 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 AADATQ8N5Z0 425 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CSGALNACT2Q8N6G5 542 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 OR56B1Q8NGI3 324 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 COQ8AQ8NI60 647 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SNX33Q8WV41 574 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC127Q96BQ5 260 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZDHHC12Q96GR4 267 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 MED30Q96HR3 178 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CDK15Q96Q40 435 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CABLES2Q9BTV7 478 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 OR2B2Q9GZK3 357 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 TEX10Q9NXF1 929 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 MYEF2Q9P2K5 600 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 IGSF9BQ9UPX0 1349 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ASB3Q9Y575 518 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 TCRBV7S3A2A0A539 114 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FAM187AA6NFU0 413 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 KPNA7A9QM74 516 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 VNN1O95497 513 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 RPL13AP40429 203 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 AP3S2P59780 193 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PSMC5P62195 406 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 HTRA4P83105 476 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PUDPQ08623 228 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PRKAA1Q13131 559 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PRRT3Q5FWE3 981 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 RHBDD2Q6NTF9 364 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 C10orf107Q8IVU9 208 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ACOT4Q8N9L9 421 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FAM47BQ8NA70 645 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC54Q8NEL0 328 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 OR2L3Q8NG85 312 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 IFI44Q8TCB0 444 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 C7orf34Q96L11 122 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CEP170P1Q96L14 293 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PANX1Q96RD7 426 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CTRCQ99895 268 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SPAG8Q99932 426 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SCNM1Q9BWG6 230 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ULBP1Q9BZM6 244 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CLMPQ9H6B4 373 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM160Q9NX00 188 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 MTMR10Q9NXD2 777 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 BTBD3Q9Y2F9 522 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 B3GALT1Q9Y5Z6 326 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CGB1A6NKQ9 187 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 WASHC1A8K0Z3 465 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SPATA31C2B4DYI2 1134 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 WASH3PC4AMC7 463 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PGRMC1O00264 195 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 POLR1CO15160 346 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 DENRO43583 198 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CDK14O94921 469 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PGK2P07205 417 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 AMD1P17707 334 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 OMPP47874 163 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 VEGFBP49765 207 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 HNRNPKP61978 463 aaKnown RBP eCLIP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CDH18Q13634 790 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF273Q14593 569 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 HES5Q5TA89 166 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PM20D1Q6GTS8 502 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ASTLQ6HA08 431 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 WASH2PQ6VEQ5 465 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 C1orf186Q6ZWK4 172 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 TECPR1Q7Z6L1 1165 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ZDHHC14Q8IZN3 488 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 LGI2Q8N0V4 545 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PHOSPHO1Q8TCT1 267 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 HAVCR1Q96D42 359 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms