RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 PPP6R3Q5H9R7 873 aaPredicted RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 IL23RQ5VWK5 629 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 FAM46CQ5VWP2 391 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 RAET1LQ5VY80 246 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 MORN5Q5VZ52 161 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 TMEM268Q5VZI3 342 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 FAM166AQ6J272 317 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 SLC18B1Q6NT16 456 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 TMEM53Q6P2H8 277 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 NIPAL3Q6P499 406 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 LRRC8BQ6P9F7 803 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 CCDC137Q6PK04 289 aaKnown RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 PQLC2Q6ZP29 291 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 STXBP4Q6ZWJ1 553 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 C16orf62Q7Z3J2 963 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 FOXRED2Q8IWF2 684 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 NELFCDQ8IXH7 590 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 CCDC36Q8IYA8 594 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 GTPBP8Q8N3Z3 284 aaPredicted RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 LRRC17Q8N6Y2 441 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 GJC3Q8NFK1 279 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 OR4N2Q8NGD1 307 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 VANGL1Q8TAA9 524 aaPredicted RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 LRRC20Q8TCA0 184 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 PHOSPHO2Q8TCD6 241 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 HM13Q8TCT9 377 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 AKAP1Q92667 903 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 MOB3AQ96BX8 217 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 PBKQ96KB5 322 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 PRMT6Q96LA8 375 aaPredicted RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 SFXN2Q96NB2 322 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 INPP4AQ96PE3 977 aaPredicted RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 TEFMQ96QE5 360 aaKnown RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 OR6C1Q96RD1 312 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 PRR25Q96S07 402 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 UBAC1Q9BSL1 405 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 PCGF1Q9BSM1 259 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 ADGRE3Q9BY15 652 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 TPSD1Q9BZJ3 242 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 SHCBP1LQ9BZQ2 653 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 OR52A5Q9H2C5 316 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 MTIF3Q9H2K0 278 aaKnown RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 SNX25Q9H3E2 840 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 RAB18Q9NP72 206 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 PNO1Q9NRX1 252 aaKnown RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 GPR173Q9NS66 373 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 MAN2C1Q9NTJ4 1040 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 MRPL22Q9NWU5 206 aaKnown RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 SMARCAL1Q9NZC9 954 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 HACD3Q9P035 362 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 DDX19BQ9UMR2 479 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 NCKAP1Q9Y2A7 1128 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 OR10H1Q9Y4A9 318 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 RNF115Q9Y4L5 304 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 CFAP65Q6ZU64 1925 aaKnown RBP4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 ADCY9O60503 1353 aa4.01□□□□□ -1.77
SMARCA5-202ENST00000508573 A0A0U1RQF3 1178 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 TMEM120BA0PK00 339 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 NPIPA2E9PIF3 369 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 WWP2O00308 870 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 TRIAP1O43715 76 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 OR10H2O60403 315 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 MYO1DO94832 1006 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 LCA5LO95447 670 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 LATS1O95835 1130 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 GSRP00390 522 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 C9P02748 559 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 CRYGBP07316 175 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 CPN1P15169 458 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 NDUFB7P17568 137 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 ZNF10P21506 573 aaPredicted RBP4□□□□□ -1.77
SMARCA5-202ENST00000508573 CERS1P27544 350 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 NDUFS1P28331 727 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 CD80P33681 288 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 HSD17B3P37058 310 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 SPAM1P38567 509 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 TNFRSF4P43489 277 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 RAB9AP51151 201 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 NUDT6P53370 316 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 TSPAN5P62079 268 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 RAB11AP62491 216 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 SKP1P63208 163 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 CSNK2A1P68400 391 aaPredicted RBP4□□□□□ -1.77
SMARCA5-202ENST00000508573 TXNL4AP83876 142 aaKnown RBP4□□□□□ -1.77
SMARCA5-202ENST00000508573 PMPCAQ10713 525 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 ILKQ13418 452 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 CUL3Q13618 768 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 PON2Q15165 354 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 P2RY14Q15391 338 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 RAB11BQ15907 218 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 CAMK4Q16566 473 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 ACKR1Q16570 336 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 TATDN3Q17R31 274 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 TMEM44Q2T9K0 475 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 HSDL1Q3SXM5 330 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 CCDC14Q49A88 953 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 AGKQ53H12 422 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 CEP78Q5JTW2 689 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 CTSL3PQ5NE16 218 aa4□□□□□ -1.77
SMARCA5-202ENST00000508573 ALS2CLQ60I27 953 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms