RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 BSCL2Q96G97 398 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 B3GALT6Q96L58 329 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 MCCC1Q96RQ3 725 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 INPP5KQ9BT40 448 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 NMUR1Q9HB89 426 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 UBE2TQ9NPD8 197 aaPredicted RBP3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 GTF3C4Q9UKN8 822 aa3.28□□□□□ -1.88
UBE2D3-225ENST00000508476 HECW2Q9P2P5 1572 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 OR5H15A6NDH6 313 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 ANKDD1BA6NHY2 528 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 TSPY2A6NKD2 308 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 FOXI3A8MTJ6 420 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 SELENOFO60613 162 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 SUPT20HL2P0C7V6 817 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 ID1P41134 155 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF41P51814 821 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 NAAAQ02083 359 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 FOLH1Q04609 750 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 GPR50Q13585 617 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 RSBN1Q5VWQ0 802 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 CARNMT1Q8N4J0 409 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 SIPA1Q96FS4 1042 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 INTS14Q96SY0 518 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 MINDY3Q9H8M7 445 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 PDRG1Q9NUG6 133 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF446Q9NWS9 450 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 RSPH14Q9UHP6 348 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 ITGA11Q9UKX5 1188 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 TMED7Q9Y3B3 224 aa3.27□□□□□ -1.89
UBE2D3-225ENST00000508476 BCLAF3A2AJT9 711 aaKnown RBP3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 CCDC162PA2VCL2 907 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 LRRTM2O43300 516 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 OR9G9P0C7N8 305 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 KRT3P12035 628 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 FASP25445 335 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 GJB2P29033 226 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 RPL34P49207 117 aaKnown RBP3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 CETN1Q12798 172 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 OLFML2AQ68BL7 652 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 NLRP14Q86W24 1093 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 NUS1Q96E22 293 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 TMX4Q9H1E5 349 aaPredicted RBP3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 MED17Q9NVC6 651 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 IL17CQ9P0M4 197 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 TTLL3Q9Y4R7 772 aa3.26□□□□□ -1.89
UBE2D3-225ENST00000508476 MRC2Q9UBG0 1479 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 IGKV6D-21A0A0A0MT36 114 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 C2orf92A0A1B0GVN3 265 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 NEDD8-MDP1E9PL57 170 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 E2F3O00716 465 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 TSC22D2O75157 780 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 RPN1P04843 607 aaKnown RBP3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 LYNP07948 512 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 VIMP08670 466 aaKnown RBP3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 ACKR3P25106 362 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 HMGCLP35914 325 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 CAPZA1P52907 286 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 FKBP1BP68106 108 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 CRMP1Q14194 572 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 ABRAXAS2Q15018 415 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 CDO1Q16878 200 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF776Q68DI1 518 aaPredicted RBP3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 REP15Q6BDI9 236 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 PM20D1Q6GTS8 502 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 CGB2Q6NT52 195 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 TRAT1Q6PIZ9 186 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 TMEM64Q6YI46 380 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 CACUL1Q86Y37 369 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 TIGD4Q8IY51 512 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 ELMOD1Q8N336 334 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 TMEM99Q8N816 258 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 C8orf46Q8TAG6 207 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 SEPT8Q92599 483 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 SGF29Q96ES7 293 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF274Q96GC6 653 aaPredicted RBP3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 PPP1R16AQ96I34 528 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 CCM2Q9BSQ5 444 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 ANAPC5Q9UJX4 755 aa3.25□□□□□ -1.89
UBE2D3-225ENST00000508476 CLSPNQ9HAW4 1339 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 KLF18A0A0U1RQI7 1052 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 HTR3EA5X5Y0 456 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 ZSCAN5CA6NGD5 496 aaPredicted RBP3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 TMCO5BA8MYB1 307 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF487B1APH4 448 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 FIBPO43427 364 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 SCO2O43819 266 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 PLOD3O60568 738 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 RHBDL1O75783 438 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 PTMAP06454 111 aaKnown RBP3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 HMGCS2P54868 508 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 CAPRIN1Q14444 709 aaKnown RBP3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 C17orf58Q2M2W7 97 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 SPOUT1Q5T280 376 aaKnown RBP3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF600Q6ZNG1 722 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 SPATA19Q7Z5L4 167 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 PHLDB2Q86SQ0 1253 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 ANKRD46Q86W74 232 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 OR8H2Q8N162 312 aa3.24□□□□□ -1.89
UBE2D3-225ENST00000508476 ZNF491Q8N8L2 437 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms