RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ADAMTS7Q9UKP4 1686 aa5.18□□□□□ -1.58
HERC4-213ENST00000506515 ANKRD31Q8N7Z5 1873 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 TJP1Q07157 1748 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 A0A0A6YYC8 382 aaPredicted RBP5.17□□□□□ -1.58
HERC4-213ENST00000506515 A0A1W2PRV1 198 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 ANTXRLA6NF34 631 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 A8MVM7 634 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 I3L1I5 382 aaPredicted RBP5.17□□□□□ -1.58
HERC4-213ENST00000506515 LINC01565O15544 149 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 ATP9AO75110 1047 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 KRT33AO76009 404 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 HMOX1P09601 288 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 ATP6V1B1P15313 513 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 CEBPBP17676 345 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 HOXD10P28358 340 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 CTNNB1P35222 781 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 PAX9P55771 341 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 XGP55808 180 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 ZNF789Q5FWF6 425 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 LRRC38Q5VT99 294 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 SIAH3Q8IW03 269 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 TDHQ8IZJ6 230 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 SMYD1Q8NB12 490 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 MRGPRDQ8TDS7 321 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 NAF1Q96HR8 494 aaKnown RBP5.17□□□□□ -1.58
HERC4-213ENST00000506515 GMPPAQ96IJ6 420 aaPredicted RBP5.17□□□□□ -1.58
HERC4-213ENST00000506515 DUX3Q96PT4 197 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 PANX3Q96QZ0 392 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 LITAFQ99732 161 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 DPEP2Q9H4A9 486 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 C5orf66Q9H5L9 145 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 ATAD3AQ9NVI7 634 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 ELF5Q9UKW6 265 aaPredicted RBP5.17□□□□□ -1.58
HERC4-213ENST00000506515 MRC1P22897 1456 aa5.17□□□□□ -1.58
HERC4-213ENST00000506515 C13orf42A0A1B0GVH6 325 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 ANKDD1BA6NHY2 528 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 SLCO1B7G3V0H7 640 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 H0YIG0 161 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 MAGEC1O60732 1142 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 CYTIPO60759 359 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 VTNP04004 478 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 VDRP11473 427 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 SOX3P41225 446 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 OR3A2P47893 321 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 CSNK2BP67870 215 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 ITGA9Q13797 1035 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 SLC39A12Q504Y0 691 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 DHRS11Q6UWP2 260 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 SIGLEC15Q6ZMC9 328 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 OR6S1Q8NH40 331 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 GATAD1Q8WUU5 269 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 KRT35Q92764 455 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 PRMT1Q99873 361 aaKnown RBP5.16□□□□□ -1.58
HERC4-213ENST00000506515 FBXL4Q9UKA2 621 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 POMT2Q9UKY4 750 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 MKI67P46013 3256 aaKnown RBP5.16□□□□□ -1.58
HERC4-213ENST00000506515 MYO3BQ8WXR4 1341 aa5.16□□□□□ -1.58
HERC4-213ENST00000506515 CACNA1SQ13698 1873 aa5.15□□□□□ -1.58
HERC4-213ENST00000506515 A0A1W2PR80 420 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 MEIOCA2RUB1 952 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 SCO2O43819 266 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 SAP30O75446 220 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 MT-ND2P03891 347 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 SBK2P0C263 348 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 OR3A3P47888 321 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 NR0B1P51843 470 aaKnown RBP5.15□□□□□ -1.59
HERC4-213ENST00000506515 OR1D5P58170 312 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 PPP2R5CQ13362 524 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 CDH18Q13634 790 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 DUSP5Q16690 384 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 SGSM1Q2NKQ1 1148 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 ARMCX4Q5H9R4 360 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 ADAMTSL4-AS1Q5T5F5 129 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 OLFM4Q6UX06 510 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 NOTCH2NLQ7Z3S9 236 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 COX8CQ7Z4L0 72 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 KLHDC8AQ8IYD2 350 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 CARNMT1Q8N4J0 409 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 SPC24Q8NBT2 197 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 RFT1Q96AA3 541 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 C2orf48Q96LS8 159 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 CCDC43Q96MW1 224 aaKnown RBP5.15□□□□□ -1.59
HERC4-213ENST00000506515 RASL10BQ96S79 203 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 CLEC7AQ9BXN2 247 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 RNPEPL1Q9HAU8 725 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 MRPL17Q9NRX2 175 aaKnown RBP5.15□□□□□ -1.59
HERC4-213ENST00000506515 GPR173Q9NS66 373 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 PLCXD1Q9NUJ7 323 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 EXOC1Q9NV70 894 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 TRPC4Q9UBN4 977 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 STX8Q9UNK0 236 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 PPP1R3CQ9UQK1 317 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 SELENOKQ9Y6D0 94 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 PFASO15067 1338 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 SH3TC1Q8TE82 1336 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 KIAA1217Q5T5P2 1943 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 CEMIPQ8WUJ3 1361 aa5.15□□□□□ -1.59
HERC4-213ENST00000506515 RTCAO00442 366 aaKnown RBP5.14□□□□□ -1.59
HERC4-213ENST00000506515 CLDN1O95832 211 aa5.14□□□□□ -1.59
HERC4-213ENST00000506515 VCLP18206 1134 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms