RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 PPP2R1BP30154 601 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 IGLV3-21P80748 117 aaPredicted RBP12.76□□□□□ -0.37
HOXC6-203ENST00000504315 ELAVL1Q15717 326 aaKnown RBP12.76□□□□□ -0.37
HOXC6-203ENST00000504315 ZNF468Q5VIY5 522 aaPredicted RBP12.76□□□□□ -0.37
HOXC6-203ENST00000504315 SPINK14Q6IE38 97 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 ZNF227Q86WZ6 799 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 ZCCHC7Q8N3Z6 543 aaKnown RBP12.76□□□□□ -0.37
HOXC6-203ENST00000504315 HORMAD2Q8N7B1 307 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 WDR20Q8TBZ3 569 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 NCLNQ969V3 563 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 MAPKAP1Q9BPZ7 522 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 TXLNGYQ9BZA5 131 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 OR51B5Q9H339 312 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 IPPKQ9H8X2 491 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 ACTR8Q9H981 624 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 ANKRD10Q9NXR5 420 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 LRFN1Q9P244 771 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
HOXC6-203ENST00000504315 XPR1Q9UBH6 696 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 NFU1Q9UMS0 254 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 ANGPTL3Q9Y5C1 460 aa12.76□□□□□ -0.37
HOXC6-203ENST00000504315 POC1B-GALNT4F8VUJ3 575 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 FOXE1O00358 373 aaPredicted RBP12.75□□□□□ -0.37
HOXC6-203ENST00000504315 PLPP1O14494 284 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 FCHO1O14526 889 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 OR7A17O14581 309 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 SSR2P43308 183 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 CYB561P49447 251 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 PMP22Q01453 160 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 CUL3Q13618 768 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 SERTAD2Q14140 314 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 AP5B1Q2VPB7 878 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 MRM1Q6IN84 353 aaKnown RBP12.75□□□□□ -0.37
HOXC6-203ENST00000504315 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 TIFABQ6ZNK6 161 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 TRMT10CQ7L0Y3 403 aaKnown RBP12.75□□□□□ -0.37
HOXC6-203ENST00000504315 CLNKQ7Z7G1 428 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 IFT20Q8IY31 132 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 RNF175Q8N4F7 328 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 TMEM151AQ8N4L1 468 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 TMEM178AQ8NBL3 297 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 C7orf57Q8NEG2 295 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 RGMAQ96B86 450 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 ANKRD9Q96BM1 317 aaPredicted RBP12.75□□□□□ -0.37
HOXC6-203ENST00000504315 REPS1Q96D71 796 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 MTERF1Q99551 399 aaKnown RBP12.75□□□□□ -0.37
HOXC6-203ENST00000504315 NTMT1Q9BV86 223 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 C1QTNF3Q9BXJ4 246 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 HES7Q9BYE0 225 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 DEFB126Q9BYW3 111 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 PNO1Q9NRX1 252 aaKnown RBP12.75□□□□□ -0.37
HOXC6-203ENST00000504315 PKDREJQ9NTG1 2253 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 MS4A12Q9NXJ0 267 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 PLEKHB1Q9UF11 243 aaPredicted RBP12.75□□□□□ -0.37
HOXC6-203ENST00000504315 FETUBQ9UGM5 382 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 UNC79Q9P2D8 2635 aa12.75□□□□□ -0.37
HOXC6-203ENST00000504315 NCKAP5O14513 1909 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 TRBV11-1A0A0K0K1C0 115 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 EXOC1LA0A1B0GW35 172 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 TMEM200CA6NKL6 621 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 RIPK2O43353 540 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 NME2P1O60361 137 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 SLC25A12O75746 678 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 SP1P08047 785 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 RPS17P08708 135 aaKnown RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 SNRPAP09012 282 aaKnown RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 SBK3P0C264 359 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 NME2P22392 152 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 EEF1DP29692 281 aaKnown RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 RPS13P62277 151 aaKnown RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 PHEXP78562 749 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 TRAF3Q13114 568 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 DDX39BQ13838 428 aaKnown RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 GGTA1PQ4G0N0 100 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 C10orf62Q5T681 223 aaPredicted RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 OR4C11Q6IEV9 310 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 SLC25A25Q6KCM7 469 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 GALNTL5Q7Z4T8 443 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 CNPY4Q8N129 248 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 TMEM132CQ8N3T6 1108 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 PTGR2Q8N8N7 351 aaPredicted RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 MORN4Q8NDC4 146 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 OR52B6Q8NGF0 335 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 OR14A16Q8NHC5 309 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 PTPMT1Q8WUK0 201 aaPredicted RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 DAZLQ92904 295 aaKnown RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 MTBPQ96DY7 904 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 FRMD6Q96NE9 622 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 MRPL57Q9BQC6 102 aaKnown RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 ALOXE3Q9BYJ1 711 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 MRPL46Q9H2W6 279 aaKnown RBP12.74□□□□□ -0.37
HOXC6-203ENST00000504315 EPB41L4BQ9H329 900 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 ZBTB26Q9HCK0 441 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 KLHL1Q9NR64 748 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 PCTPQ9UKL6 214 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 OSGIN2Q9Y236 505 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 RNF11Q9Y3C5 154 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 SPACA6W5XKT8 324 aa12.74□□□□□ -0.37
HOXC6-203ENST00000504315 A0A0A6YYD5 115 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms