RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TM9SF2Q99805 663 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 TUBA1CQ9BQE3 449 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 NUP62CLQ9H1M0 184 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 HSD3B7Q9H2F3 369 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 LRRC40Q9H9A6 602 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 ADAP2Q9NPF8 381 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 CCDC177Q9NQR7 707 aaPredicted RBP11.42□□□□□ -0.58
LSM6-204ENST00000504181 CATSPERZQ9NTU4 200 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 ZNF148Q9UQR1 794 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 A0A096LNT2 108 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 MYOCOSA0A1B0GUC4 107 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 MACROD2A1Z1Q3 448 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 OVOL3O00110 214 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 MSTNO14793 375 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 NRDCO43847 1150 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 NDUFS7O75251 213 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 NIPSNAP2O75323 286 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 NUDT7P0C024 238 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 POU2F1P14859 743 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 IGFBP5P24593 272 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 IMPA1P29218 277 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 ATP5DP30049 168 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 GRK3P35626 688 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 UGT2B10P36537 528 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 HNF4AP41235 474 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 TTPAP49638 278 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 TBPL1P62380 186 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 RNF4P78317 190 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 ASPHQ12797 758 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 ZNF791Q3KP31 576 aaPredicted RBP11.41□□□□□ -0.58
LSM6-204ENST00000504181 ACSBG2Q5FVE4 666 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 TSTD2Q5T7W7 516 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 ANKRD34AQ69YU3 496 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 NIPAL1Q6NVV3 410 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.41□□□□□ -0.58
LSM6-204ENST00000504181 CDKL3Q8IVW4 592 aaPredicted RBP11.41□□□□□ -0.58
LSM6-204ENST00000504181 SCUBE1Q8IWY4 988 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 CA13Q8N1Q1 262 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 TMEM132CQ8N3T6 1108 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 TC2NQ8N9U0 490 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 FAM13CQ8NE31 585 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 SLC35G2Q8TBE7 412 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 ZNF597Q96LX8 424 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 FAM118BQ9BPY3 351 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 DOHHQ9BU89 302 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 HEMGNQ9BXL5 484 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 FAM129AQ9BZQ8 928 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 OR8D2Q9GZM6 311 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 PRTFDC1Q9NRG1 225 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 NENFQ9UMX5 172 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 CLDN16Q9Y5I7 305 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 CLCA3PQ9Y6N3 262 aa11.41□□□□□ -0.58
LSM6-204ENST00000504181 IGHV4-30-2A0A087WSY4 118 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 GFYI3L273 518 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 APOC4-APOC2K7ER74 178 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 LMX1BO60663 402 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 TNFSF13O75888 250 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 APOC2P02655 101 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 C1QAP02745 245 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 IFNA16P05015 189 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 CDH1P12830 882 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 CHRM3P20309 590 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 HNRNPFP52597 415 aaKnown RBP11.4□□□□□ -0.58
LSM6-204ENST00000504181 VLDLRP98155 873 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 SLC13A2Q13183 592 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 TOMM20Q15388 145 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 RPS6KA1Q15418 735 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 ELAVL1Q15717 326 aaKnown RBP11.4□□□□□ -0.58
LSM6-204ENST00000504181 EIPR1Q53HC9 387 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 BEX5Q5H9J7 111 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 NHSL2Q5HYW2 709 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 DARS2Q6PI48 645 aaKnown RBP11.4□□□□□ -0.58
LSM6-204ENST00000504181 SH2D5Q6ZV89 423 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 CLNKQ7Z7G1 428 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 C17orf64Q86WR6 236 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 OR52K1Q8NGK4 314 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 GABPB2Q8TAK5 448 aaPredicted RBP11.4□□□□□ -0.58
LSM6-204ENST00000504181 ZPLD1Q8TCW7 415 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 UTP15Q8TED0 518 aaKnown RBP11.4□□□□□ -0.58
LSM6-204ENST00000504181 AKAP1Q92667 903 aaKnown RBP eCLIP11.4□□□□□ -0.58
LSM6-204ENST00000504181 ABTB1Q969K4 478 aaPredicted RBP11.4□□□□□ -0.58
LSM6-204ENST00000504181 TNFRSF13CQ96RJ3 184 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 ACBD3Q9H3P7 528 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 CHODLQ9H9P2 273 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 GALPQ9UBC7 116 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 ZNF281Q9Y2X9 895 aa11.4□□□□□ -0.58
LSM6-204ENST00000504181 VWFP04275 2813 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 A0A1W2PNV4 684 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 CD3EAPO15446 510 aaKnown RBP11.39□□□□□ -0.59
LSM6-204ENST00000504181 KLF4O43474 513 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 TCF21O43680 179 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 OR1F1O43749 312 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 SPOPO43791 374 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 METTL18O95568 372 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 HPNP05981 417 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 RBP3P10745 1247 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 ITGA2P17301 1181 aa11.39□□□□□ -0.59
LSM6-204ENST00000504181 RPS3P23396 243 aaKnown RBP eCLIP11.39□□□□□ -0.59
LSM6-204ENST00000504181 KCNJ5P48544 419 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms