RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 MICAQ29983 383 aa17.08■□□□□ 0.32
POLR2J3-209ENST00000504157 PAN2Q504Q3 1202 aaKnown RBP17.08■□□□□ 0.32
POLR2J3-209ENST00000504157 CNIH2Q6PI25 160 aa17.08■□□□□ 0.32
POLR2J3-209ENST00000504157 ZNF730Q6ZMV8 503 aa17.08■□□□□ 0.32
POLR2J3-209ENST00000504157 MON1AQ86VX9 555 aa17.08■□□□□ 0.32
POLR2J3-209ENST00000504157 IFNL1Q8IU54 200 aa17.08■□□□□ 0.32
POLR2J3-209ENST00000504157 OR4C15Q8NGM1 316 aa17.08■□□□□ 0.32
POLR2J3-209ENST00000504157 OR9Q1Q8NGQ5 310 aa17.08■□□□□ 0.32
POLR2J3-209ENST00000504157 ADAM30Q9UKF2 790 aa17.08■□□□□ 0.32
POLR2J3-209ENST00000504157 C7orf66A4D0T2 115 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 LOC730098B7Z3J9 87 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 ACSL4O60488 711 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 HMGN1P05114 100 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 OR56A5P0C7T3 313 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 HLA-EP13747 358 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 CTPS1P17812 591 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 STOMP27105 288 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 KIR3DL1P43629 444 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 AP1S2P56377 157 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 MLLT11Q13015 90 aaPredicted RBP17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 ZRANB3Q5FWF4 1079 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 CEP76Q8TAP6 659 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 SMG7Q92540 1137 aaKnown RBP17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 TPD52L3Q96J77 140 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 NIPSNAP1Q9BPW8 284 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 MND1Q9BWT6 205 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 SLC25A19Q9HC21 320 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 SDHAF2Q9NX18 166 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 WWOXQ9NZC7 414 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 CLEC2DQ9UHP7 191 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 RAB23Q9ULC3 237 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 COPS3Q9UNS2 423 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 SCML2Q9UQR0 700 aa17.07■□□□□ 0.32
POLR2J3-209ENST00000504157 MEIS3P2A8K0S8 358 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 KRBOX1C9JBD0 128 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 B3GALT4O96024 378 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 PAHP00439 452 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 CFDP00746 253 aaPredicted RBP17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 FOSL1P15407 271 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 SDC1P18827 310 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 SLC6A1P30531 599 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 RGS4P49798 205 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 ZNF81P51508 661 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 FLI1Q01543 452 aaPredicted RBP17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 P2RY14Q15391 338 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 SNAPC1Q16533 368 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 SGO1Q5FBB7 561 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 MEDAGQ5VYS4 303 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 TSEN54Q7Z6J9 526 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 MS4A15Q8N5U1 240 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 CMTM7Q96FZ5 175 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 ZIC5Q96T25 663 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 ELP3Q9H9T3 547 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 FZD3Q9NPG1 666 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 NLRC5Q86WI3 1866 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 ISM1B1AKI9 464 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 SUV39H1O43463 412 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 AKAP8O43823 692 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 SNAI1O95863 264 aaPredicted RBP17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 HMBSP08397 361 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 HBQ1P09105 142 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 EPB42P16452 691 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 IGSF11Q5DX21 431 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 CST9Q5W186 159 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 LUZP2Q86TE4 346 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 PDZD3Q86UT5 571 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 ADGRF3Q8IZF5 1079 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 TMEM163Q8TC26 289 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 ST8SIA2Q92186 375 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 DOHHQ9BU89 302 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 GHITMQ9H3K2 345 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 MED9Q9NWA0 146 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 ENOPH1Q9UHY7 261 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 ZNF222Q9UK12 451 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 LIPT1Q9Y234 373 aa17.06■□□□□ 0.32
POLR2J3-209ENST00000504157 PRAMEF33A0A0G2JMD5 474 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 IQCF5A8MTL0 148 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 M0QZQ0 153 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 GTPBP1O00178 669 aaKnown RBP17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 CBX4O00257 560 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 FPGTO14772 594 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 PRMT3O60678 531 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 PRAMEF10O60809 474 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 ADAM11O75078 769 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 CLDN9O95484 217 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 OR1E1P30953 314 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 CRYBA2P53672 197 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 BOP1Q14137 746 aaKnown RBP17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 NCF4Q15080 339 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 DUSP6Q16828 381 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 RNLSQ5VYX0 342 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 PTCHD4Q6ZW05 846 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 METTL3Q86U44 580 aaKnown RBP17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 ZNF784Q8NCA9 323 aaPredicted RBP17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 OR6C4Q8NGE1 309 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 SCMH1Q96GD3 660 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 TSSK3Q96PN8 268 aa17.05■□□□□ 0.32
POLR2J3-209ENST00000504157 KATNB1Q9BVA0 655 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms