RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 PGM2Q96G03 612 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 RAB3IPQ96QF0 476 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-203ENST00000503274 CDCA3Q99618 268 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-203ENST00000503274 SDCBP2Q9H190 292 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 ANAPC5Q9UJX4 755 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 CCPG1Q9ULG6 757 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 Q9Y3F1 56 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 COL11A1P12107 1806 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-203ENST00000503274 RAD50Q92878 1312 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 SYNRGQ9UMZ2 1314 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 PLXNA1Q9UIW2 1896 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 A0A0G2JMZ2 1700 aa4.92□□□□□ -1.62
NIPBL-203ENST00000503274 FRMPD3Q5JV73 1810 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 BDP1A6H8Y1 2624 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 A0A0J9YWU9 116 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.91□□□□□ -1.62
NIPBL-203ENST00000503274 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.91□□□□□ -1.62
NIPBL-203ENST00000503274 ANXA2P2A6NMY6 339 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 LUC7L3O95232 432 aaKnown RBP4.91□□□□□ -1.62
NIPBL-203ENST00000503274 SUPT20HL2P0C7V6 817 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 HSPD1P10809 573 aaKnown RBP4.91□□□□□ -1.62
NIPBL-203ENST00000503274 TCF4P15884 667 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 HLA-FP30511 346 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 CNTN2Q02246 1040 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 PTPN14Q15678 1187 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 FAM174BQ3ZCQ3 159 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 ZNF613Q6PF04 617 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 ABI3BPQ7Z7G0 1075 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 RCOR2Q8IZ40 523 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 NME8Q8N427 588 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 FAM89BQ8N5H3 189 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 MAPK1IP1LQ8NDC0 245 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 ZNF519Q8TB69 540 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 ZNF689Q96CS4 500 aaPredicted RBP4.91□□□□□ -1.62
NIPBL-203ENST00000503274 SIPA1Q96FS4 1042 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 NSMCE3Q96MG7 304 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 AGAP3Q96P47 875 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 UPF3AQ9H1J1 476 aaKnown RBP4.91□□□□□ -1.62
NIPBL-203ENST00000503274 SNX25Q9H3E2 840 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 PANK4Q9NVE7 773 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 CYP39A1Q9NYL5 469 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 GIMAP2Q9UG22 337 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 CTNNA3Q9UI47 895 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 PRDM4Q9UKN5 801 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 SNX7Q9UNH6 387 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 ZMYM6O95789 1325 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 CCDC171Q6TFL3 1326 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 VCANP13611 3396 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 EYSQ5T1H1 3165 aa4.91□□□□□ -1.62
NIPBL-203ENST00000503274 CHD9Q3L8U1 2897 aa4.9□□□□□ -1.62
NIPBL-203ENST00000503274 PARP14Q460N5 1801 aa4.9□□□□□ -1.62
NIPBL-203ENST00000503274 TRANK1O15050 2925 aa4.9□□□□□ -1.62
NIPBL-203ENST00000503274 A0A1W2PPW3 197 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 ANTXRLA6NF34 631 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 CCL24O00175 119 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 NMT2O60551 498 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 SERPING1P05155 500 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 QDPRP09417 244 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 ZSCAN5DPP0CG00 497 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 ELAVL4P26378 380 aaKnown RBP4.9□□□□□ -1.63
NIPBL-203ENST00000503274 NOVP48745 357 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 RGS7P49802 495 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 XGP55808 180 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 CYCSP99999 105 aaKnown RBP4.9□□□□□ -1.63
NIPBL-203ENST00000503274 CACNG1Q06432 222 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 TRDNQ13061 729 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 IMMTQ16891 758 aaKnown RBP4.9□□□□□ -1.63
NIPBL-203ENST00000503274 FASTKD1Q53R41 847 aaKnown RBP4.9□□□□□ -1.63
NIPBL-203ENST00000503274 STXBP4Q6ZWJ1 553 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 FCRLAQ7L513 359 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 NRARPQ7Z6K4 114 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 AMIGO1Q86WK6 493 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 FAM219AQ8IW50 185 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 SEPT1Q8WYJ6 367 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 NSMAFQ92636 917 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 KLHL5Q96PQ7 755 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 IWS1Q96ST2 819 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 NDNQ99608 321 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 CDX2Q99626 313 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-203ENST00000503274 TRIM15Q9C019 465 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 KRT23Q9C075 422 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 SPHK2Q9NRA0 654 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 PKD2L2Q9NZM6 624 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 WDR19Q8NEZ3 1342 aa4.9□□□□□ -1.63
NIPBL-203ENST00000503274 A0A0D9SFI3 127 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 KPNA7A9QM74 516 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-203ENST00000503274 IGHEP01854 428 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 TRIM49P0CI25 452 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 TRIM49CP0CI26 452 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 PDHBP11177 359 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 FOSL2P15408 326 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 EPORP19235 508 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 PRKACGP22612 351 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 CALML3P27482 149 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 TSFMP43897 325 aaKnown RBP4.89□□□□□ -1.63
NIPBL-203ENST00000503274 NPY4RP50391 375 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 SNAP25P60880 206 aa4.89□□□□□ -1.63
NIPBL-203ENST00000503274 HAND2P61296 217 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms