RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 YWHAHQ04917 246 aaPredicted RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 IFFO1Q0D2I5 559 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 GPR17Q13304 367 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 PEX6Q13608 980 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 ITIH4Q14624 930 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 CRYMQ14894 314 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 SNCBQ16143 134 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 GLRA4Q5JXX5 417 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 TXNDC8Q6A555 127 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 ZNF343Q6P1L6 599 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 ALKBH5Q6P6C2 394 aaKnown RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 DOK6Q6PKX4 331 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 SH2D5Q6ZV89 423 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 OTUD6AQ7L8S5 288 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 MAATS1Q7Z4T9 603 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 KLHL7Q8IXQ5 586 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 CACNA2D3Q8IZS8 1091 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 EID2Q8N6I1 236 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 TMEM161BQ8NDZ6 487 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 BEST2Q8NFU1 509 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 OR6Y1Q8NGX8 325 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 ZNF564Q8TBZ8 553 aaPredicted RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 SSC4DQ8WTU2 575 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 SCFD1Q8WVM8 642 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 ZNRF4Q8WWF5 429 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 TAF4BQ92750 862 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 IGSF8Q969P0 613 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 MAGOHBQ96A72 148 aaKnown RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 C18orf25Q96B23 403 aaPredicted RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 SKA1Q96BD8 255 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 HVCN1Q96D96 273 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 ERLEC1Q96DZ1 483 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 SGF29Q96ES7 293 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 CHMP6Q96FZ7 201 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 CCDC114Q96M63 670 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 SEPT5Q99719 369 aaPredicted RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 REEP2Q9BRK0 252 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 DDX47Q9H0S4 455 aaKnown RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 POLR3FQ9H1D9 316 aaPredicted RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 LINC00597Q9H2U6 94 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 RAD21L1Q9H4I0 556 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 PPP1R3EQ9H7J1 279 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 CNOT10Q9H9A5 744 aaKnown RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 CHODLQ9H9P2 273 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 POLR1BQ9H9Y6 1135 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 TRPC7Q9HCX4 862 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 ZDHHC4Q9NPG8 344 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 PPANQ9NQ55 473 aaKnown RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 FAM114A2Q9NRY5 505 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 HAUS2Q9NVX0 235 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 WSB2Q9NYS7 404 aaPredicted RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 TUBGCP4Q9UGJ1 667 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 ANAPC2Q9UJX6 822 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 FBXO9Q9UK97 447 aaPredicted RBP2.81□□□□□ -1.96
PROM1-203ENST00000502943 ODF2LQ9ULJ1 636 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 SUFUQ9UMX1 484 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 TRAF3IP3Q9Y228 551 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 COL4A2P08572 1712 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 TRIP11Q15643 1979 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 SVILO95425 2214 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 KNL1Q8NG31 2342 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 FLNCQ14315 2725 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 ITPR2Q14571 2701 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 BSNQ9UPA5 3926 aa2.81□□□□□ -1.96
PROM1-203ENST00000502943 NBASA2RRP1 2371 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 SCN1AP35498 2009 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 CEP192Q8TEP8 1941 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 KIF26AQ9ULI4 1882 aaPredicted RBP2.8□□□□□ -1.96
PROM1-203ENST00000502943 A0A087WV62 115 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 SMIM28A0A1B0GU29 152 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 ZCWPW2A0A1B0GU75 182 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 GOLGA6L7A0A1B0GV03 622 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 GTPBP10A4D1E9 387 aaKnown RBP2.8□□□□□ -1.96
PROM1-203ENST00000502943 CFAP73A6NFT4 308 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 TMEM202A6NGA9 273 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.8□□□□□ -1.96
PROM1-203ENST00000502943 STX16-NPEPL1H3BU86 382 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 PDXKO00764 312 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 STX16O14662 325 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 CETN3O15182 167 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 EIF3DO15371 548 aaKnown RBP eCLIP2.8□□□□□ -1.96
PROM1-203ENST00000502943 SLC16A4O15374 487 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 TGFB1I1O43294 461 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 LUC7L3O95232 432 aaKnown RBP2.8□□□□□ -1.96
PROM1-203ENST00000502943 AGTP01019 485 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 NR3C1P04150 777 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 SHBGP04278 402 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 H2AFZP0C0S5 128 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 PLA2G4BP0C869 781 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 FERP16591 822 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 CKMT2P17540 419 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 CTNNA2P26232 953 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 RPL9P32969 192 aaKnown RBP2.8□□□□□ -1.96
PROM1-203ENST00000502943 OPRD1P41143 372 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 ACADVLP49748 655 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 CCNG1P51959 295 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 RAD23BP54727 409 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 GALCP54803 685 aa2.8□□□□□ -1.96
PROM1-203ENST00000502943 IFI35P80217 286 aaPredicted RBP2.8□□□□□ -1.96
PROM1-203ENST00000502943 NFIL3Q16649 462 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms