RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CLDN16Q9Y5I7 305 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 IKBKGQ9Y6K9 419 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 SPACA6W5XKT8 324 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 POLEQ07864 2286 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 NCOA6Q14686 2063 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 LRRC14BA6NHZ5 514 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 SAP18O00422 153 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 RTCAO00442 366 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 KLK8O60259 260 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 NME2P1O60361 137 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 UGDHO60701 494 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 CTNSO60931 367 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 LDB3O75112 727 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 ITGA10O75578 1167 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 TUBB4AP04350 444 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 INHBAP08476 426 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 CTAGE8P0CG41 777 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 NME2P22392 152 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 HIST1H1TP22492 207 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 CPN2P22792 545 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 TRHRP34981 398 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 SERPINB9P50453 376 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 HLCSP50747 726 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 GPR143P51810 404 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 RAP1GDS1P52306 607 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 CASP6P55212 293 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 PHEXP78562 749 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 STX4Q12846 297 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 DDX39BQ13838 428 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 SERTAD2Q14140 314 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 PCBP2Q15366 365 aaKnown RBP eCLIP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 ELAVL1Q15717 326 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 GLE1Q53GS7 698 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 KRTCAP3Q53RY4 240 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 TECRLQ5HYJ1 363 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 DEPDC1Q5TB30 811 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 KHDRBS2Q5VWX1 349 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 OR4C11Q6IEV9 310 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 METTL2BQ6P1Q9 378 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 TAOK1Q7L7X3 1001 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 GOLGA7Q7Z5G4 137 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 CTAGE4Q8IX94 777 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 TMEM132CQ8N3T6 1108 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 RNF175Q8N4F7 328 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 TMEM156Q8N614 296 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 NOA1Q8NC60 698 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 HUS1BQ8NHY5 278 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 SLC44A1Q8WWI5 657 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 DAZLQ92904 295 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 GPR137Q96N19 417 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 GPR78Q96P69 363 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 PAFAH2Q99487 392 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 MAPKAP1Q9BPZ7 522 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 CENPKQ9BS16 269 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 ALOXE3Q9BYJ1 711 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 TSPAN10Q9H1Z9 355 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 OR51B5Q9H339 312 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 ACTR8Q9H981 624 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 CPSF2Q9P2I0 782 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 SUCOQ9UBS9 1254 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 VTI1BQ9UEU0 232 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 SH3BGRL2Q9UJC5 107 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF223Q9UK11 482 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 KLF13Q9Y2Y9 288 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 PCDHGA11Q9Y5H2 935 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 TNPO3Q9Y5L0 923 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 CLCA3PQ9Y6N3 262 aa7.9□□□□□ -1.14
HMGXB4-207ENST00000498212 UTP20O75691 2785 aaKnown RBP7.9□□□□□ -1.15
HMGXB4-207ENST00000498212 USP9YO00507 2555 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 LRRK2Q5S007 2527 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 CACNA1DQ01668 2161 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 MYOCOSA0A1B0GUC4 107 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 NPIPA5E9PKD4 350 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 POC1B-GALNT4F8VUJ3 575 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 H0YIV9 168 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 KLRC4-KLRK1H3BQV0 150 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 KIF2AO00139 706 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 CCL21O00585 134 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 PLPP1O14494 284 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 PRKNO60260 465 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 SLC19A2O60779 497 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 WISP2O76076 250 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 ZFAND5O76080 213 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 SCELO95171 688 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 SIX3O95343 332 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 RBP1P09455 135 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 ZNF24P17028 368 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 TNNI3P19429 210 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 CNTFP26441 200 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 ECHS1P30084 290 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 DCTP40126 519 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 ARL1P40616 181 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 PIK3CBP42338 1070 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 CA7P43166 264 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 PIK3CGP48736 1102 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 SSR4P51571 173 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 ARFIP1P53367 373 aa7.89□□□□□ -1.15
HMGXB4-207ENST00000498212 SLAMF1Q13291 335 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms