RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 NR2F6P10588 404 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 WT1P19544 449 aaPredicted RBP11.21□□□□□ -0.61
CUX1-210ENST00000497815 JAK1P23458 1154 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 OTX2P32243 289 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 BUD31P41223 144 aaPredicted RBP11.21□□□□□ -0.61
CUX1-210ENST00000497815 ALDH9A1P49189 494 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 TAS2R50P59544 299 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 GNGT1P63211 74 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 BTG2P78543 158 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 TNFRSF17Q02223 184 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 SLC13A2Q13183 592 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 KIAA0040Q15053 153 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 MRM1Q6IN84 353 aaKnown RBP11.21□□□□□ -0.61
CUX1-210ENST00000497815 LRRC69Q6ZNQ3 347 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 CLNKQ7Z7G1 428 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 PROSER1Q86XN7 944 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 SPACA3Q8IXA5 215 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 MMP21Q8N119 569 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 OR2Y1Q8NGV0 311 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 CLHC1Q8NHS4 586 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 ADAMTS18Q8TE60 1221 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 C16orf78Q8WTQ4 265 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 STARD8Q92502 1023 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 UCN3Q969E3 161 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 C11orf24Q96F05 449 aaPredicted RBP11.21□□□□□ -0.61
CUX1-210ENST00000497815 OR1F2PQ96R84 312 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 CCNL2Q96S94 520 aaPredicted RBP11.21□□□□□ -0.61
CUX1-210ENST00000497815 TGIF2Q9GZN2 237 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 VN1R1Q9GZP7 353 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 LANCL2Q9NS86 450 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 MS4A12Q9NXJ0 267 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 BAIAP2L1Q9UHR4 511 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 DCTN4Q9UJW0 460 aa11.21□□□□□ -0.61
CUX1-210ENST00000497815 MRPS33Q9Y291 106 aaKnown RBP11.21□□□□□ -0.61
CUX1-210ENST00000497815 KNTC1P50748 2209 aa11.21□□□□□ -0.62
CUX1-210ENST00000497815 SCN3AQ9NY46 2000 aa11.21□□□□□ -0.62
CUX1-210ENST00000497815 WASHC1A8K0Z3 465 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 IDSB3KWA1 339 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 NPIPB8E9PQR5 432 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 CYR61O00622 381 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 PROM1O43490 865 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 PRMT3O60678 531 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 GUCY1B2O75343 617 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 VPS4BO75351 444 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 CREG1O75629 220 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 PRKAR1AP10644 381 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 BCKDHAP12694 445 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 LBPP18428 481 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 SDC1P18827 310 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 MAOAP21397 527 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 IL10P22301 178 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 TACR1P25103 407 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 ITPKBP27987 946 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 MAPK1P28482 360 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 TLX1P31314 330 aaPredicted RBP11.2□□□□□ -0.62
CUX1-210ENST00000497815 IDH3AP50213 366 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 EFNA3P52797 238 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 EMP2P54851 167 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 FOXK2Q01167 660 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 MC1RQ01726 317 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 ID2Q02363 134 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 ZNF763Q0D2J5 394 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 IL10RAQ13651 578 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 TUBB8Q3ZCM7 444 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 ATP1A1-AS1Q5TC04 95 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 NDUFAF5Q5TEU4 345 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 BROXQ5VW32 411 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 IL23RQ5VWK5 629 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 GALNT18Q6P9A2 607 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 EPGNQ6UW88 154 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 OR4N5Q8IXE1 308 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 LIX1Q8N485 282 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 RFWD2Q8NHY2 731 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 TSLPQ969D9 159 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 GFM2Q969S9 779 aaKnown RBP11.2□□□□□ -0.62
CUX1-210ENST00000497815 TM4SF18Q96CE8 201 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 METTL2AQ96IZ6 378 aaKnown RBP11.2□□□□□ -0.62
CUX1-210ENST00000497815 EGLN2Q96KS0 407 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 PTCHD1Q96NR3 888 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 TSSK3Q96PN8 268 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 OR52B2Q96RD2 323 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 EBF4Q9BQW3 602 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 MESP1Q9BRJ9 268 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 EFHD1Q9BUP0 239 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 RPF2Q9H7B2 306 aaKnown RBP11.2□□□□□ -0.62
CUX1-210ENST00000497815 WDR41Q9HAD4 459 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 PRTFDC1Q9NRG1 225 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 SIRT5Q9NXA8 310 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 G3BP2Q9UN86 482 aaKnown RBP11.2□□□□□ -0.62
CUX1-210ENST00000497815 EIF3LQ9Y262 564 aaKnown RBP11.2□□□□□ -0.62
CUX1-210ENST00000497815 TMED5Q9Y3A6 229 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 PCDHGA6Q9Y5G7 932 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 NCOR2Q9Y618 2525 aa11.2□□□□□ -0.62
CUX1-210ENST00000497815 A0A0G2JND7 137 aa11.19□□□□□ -0.62
CUX1-210ENST00000497815 CDC14CA4D256 554 aa11.19□□□□□ -0.62
CUX1-210ENST00000497815 TMEM8BA6NDV4 472 aa11.19□□□□□ -0.62
CUX1-210ENST00000497815 CLDN4O14493 209 aa11.19□□□□□ -0.62
CUX1-210ENST00000497815 PGRMC2O15173 223 aa11.19□□□□□ -0.62
CUX1-210ENST00000497815 NKX2-8O15522 239 aa11.19□□□□□ -0.62
CUX1-210ENST00000497815 AKAP10O43572 662 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms