RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF548Q8NEK5 533 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 BPIFCQ8NFQ6 507 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 Q8TCH9 128 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 TMEM45BQ96B21 275 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 NRBF2Q96F24 287 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 ZFYVE19Q96K21 471 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 C12orf66Q96MD2 445 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 ANKRD27Q96NW4 1050 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 GFM1Q96RP9 751 aaKnown RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 TESK2Q96S53 571 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 SLC39A3Q9BRY0 314 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 ALKBH7Q9BT30 221 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 VN1R1Q9GZP7 353 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 ZMYND12Q9H0C1 365 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 RIMS4Q9H426 269 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 MARCH7Q9H992 704 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 KLHL9Q9P2J3 617 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 YIPF1Q9Y548 306 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 RAI2Q9Y5P3 530 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 HS3ST3A1Q9Y663 406 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 LRPPRCP42704 1394 aaKnown RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 DCCP43146 1447 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 YTHDC2Q9H6S0 1430 aaKnown RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 FNDC1Q4ZHG4 1894 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 MED19A0JLT2 244 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 PCP4L1A6NKN8 68 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 TCP11X1B4DZS4 312 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 NPIPA2E9PIF3 369 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 ZNF197O14709 1029 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 ARPC3O15145 178 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CETN3O15182 167 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 NVLO15381 856 aaKnown RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 ARHGEF9O43307 516 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 SYT7O43581 403 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 LCMT2O60294 686 aaKnown RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CIDEAO60543 219 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 WISP2O76076 250 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 JTBO76095 146 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 EPOP01588 193 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CHRNA1P02708 482 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 IVLP07476 585 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 APRTP07741 180 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 F3P13726 295 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 UQCRC2P22695 453 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 ACRV1P26436 265 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 NF2P35240 595 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 EPS15P42566 896 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CLCN4P51793 760 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 VAMP7P51809 220 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 PGGT1BP53609 377 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 BLOC1S1P78537 153 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 LIPEQ05469 1076 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 EEF1A2Q05639 463 aaKnown RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 HYAL1Q12794 435 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 NME3Q13232 169 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 BTG3Q14201 252 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 MED1Q15648 1581 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CTF1Q16619 201 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 ZNF528Q3MIS6 628 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 DCAF4L1Q3SXM0 396 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 FAM153CQ494X1 144 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 SPANXN2Q5MJ10 180 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 METTL11BQ5VVY1 283 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 ZSCAN25Q6NSZ9 544 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 KDM7AQ6ZMT4 941 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 FAM57BQ71RH2 274 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 KNDC1Q76NI1 1749 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 BZW1Q7L1Q6 419 aaKnown RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 TRPM8Q7Z2W7 1104 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 PALM2Q8IXS6 379 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 ZNF683Q8IZ20 524 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 SLC44A3Q8N4M1 653 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CPSF7Q8N684 471 aaKnown RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 ARFGAP2Q8N6H7 521 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 NOA1Q8NC60 698 aaKnown RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 OR5D13Q8NGL4 314 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 OR13J1Q8NGT2 312 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 FGFBP3Q8TAT2 258 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 RAET1EQ8TD07 263 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CACTINQ8WUQ7 758 aaKnown RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 COQ2Q96H96 371 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 TMEM19Q96HH6 336 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 SENP5Q96HI0 755 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 FAM84BQ96KN1 310 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 FAM20AQ96MK3 541 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CHP1Q99653 195 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CMKLR1Q99788 373 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 CITED1Q99966 193 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 WDR77Q9BQA1 342 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 RTP3Q9BQQ7 232 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 WRAP53Q9BUR4 548 aaKnown RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 SPRTNQ9H040 489 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 C5orf66Q9H5L9 145 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 SGK2Q9HBY8 427 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 NEK6Q9HC98 313 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 ZFP14Q9HCL3 533 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 NOX4Q9NPH5 578 aa5.61□□□□□ -1.51
BRCA1-224ENST00000497488 AURKAIP1Q9NWT8 199 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 FAM120CQ9NX05 1096 aaKnown RBP5.61□□□□□ -1.51
BRCA1-224ENST00000497488 AGO2Q9UKV8 859 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms