RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 TUBA3CQ13748 450 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 NR6A1Q15406 480 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 C10orf62Q5T681 223 aaPredicted RBP17.46■□□□□ 0.39
RPN1-208ENST00000497415 TUBA3EQ6PEY2 450 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 RPS19BP1Q86WX3 136 aaKnown RBP17.46■□□□□ 0.39
RPN1-208ENST00000497415 TDRPQ86YL5 185 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 FAM26EQ8N5C1 309 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 B3GNT7Q8NFL0 401 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 GRHL3Q8TE85 626 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 FAR1Q8WVX9 515 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 CDCP1Q9H5V8 836 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 PPCSQ9HAB8 311 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 ADAP2Q9NPF8 381 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 SEMA4BQ9NPR2 832 aaPredicted RBP17.46■□□□□ 0.39
RPN1-208ENST00000497415 MS4A12Q9NXJ0 267 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 ABI3Q9P2A4 366 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 VTI1BQ9UEU0 232 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 TBK1Q9UHD2 729 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 FBXW2Q9UKT8 454 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 PCDHGB6Q9Y5F9 930 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 SPACA6W5XKT8 324 aa17.46■□□□□ 0.39
RPN1-208ENST00000497415 A0A1B0GTL3 188 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 GOLGA8RI6L899 631 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 DLX3O60479 287 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 PRAMEF2O60811 474 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 MYO1DO94832 1006 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 PYGBP11216 843 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 CPN2P22792 545 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 PPP2R1BP30154 601 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 CD96P40200 585 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 RASA2Q15283 850 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 ELAVL1Q15717 326 aaKnown RBP17.45■□□□□ 0.38
RPN1-208ENST00000497415 FRG2Q64ET8 278 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 ZNF324BQ6AW86 544 aaPredicted RBP17.45■□□□□ 0.38
RPN1-208ENST00000497415 SH2D5Q6ZV89 423 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 RPS27LQ71UM5 84 aaKnown RBP17.45■□□□□ 0.38
RPN1-208ENST00000497415 MILR1Q7Z6M3 343 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 CLNKQ7Z7G1 428 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 MDS2Q8NDY4 140 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 C7orf57Q8NEG2 295 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 MYRIPQ8NFW9 859 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 OR4F6Q8NGB9 312 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 SUN3Q8TAQ9 357 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 UBLCP1Q8WVY7 318 aaPredicted RBP17.45■□□□□ 0.38
RPN1-208ENST00000497415 FRG2BQ96QU4 278 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 TAAR6Q96RI8 345 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 ALOXE3Q9BYJ1 711 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 DDX31Q9H8H2 851 aaKnown RBP17.45■□□□□ 0.38
RPN1-208ENST00000497415 DCDC2Q9UHG0 476 aa17.45■□□□□ 0.38
RPN1-208ENST00000497415 A0A0A6YYD5 115 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 A0A1W2PPM1 405 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 GABRR3A8MPY1 467 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 PPP6CO00743 305 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 ZNF500O60304 480 aaPredicted RBP17.44■□□□□ 0.38
RPN1-208ENST00000497415 SEMA3DO95025 777 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 OTCP00480 354 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 ATP5F1P24539 256 aaPredicted RBP17.44■□□□□ 0.38
RPN1-208ENST00000497415 HSD17B3P37058 310 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 ARL1P40616 181 aaPredicted RBP17.44■□□□□ 0.38
RPN1-208ENST00000497415 CLCN2P51788 898 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 CDH13P55290 713 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 MLF1P58340 268 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 HERVK_113P63132 956 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 SERTAD2Q14140 314 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 UNC50Q53HI1 259 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 MRM1Q6IN84 353 aaKnown RBP17.44■□□□□ 0.38
RPN1-208ENST00000497415 FAM180AQ6UWF9 173 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 GPR180Q86V85 440 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 TMEM132CQ8N3T6 1108 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 ST6GALNAC3Q8NDV1 305 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 ANKRD9Q96BM1 317 aaPredicted RBP17.44■□□□□ 0.38
RPN1-208ENST00000497415 MTFMTQ96DP5 389 aaKnown RBP17.44■□□□□ 0.38
RPN1-208ENST00000497415 VMP1Q96GC9 406 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 SERPINI1Q99574 410 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 UTP23Q9BRU9 249 aaKnown RBP17.44■□□□□ 0.38
RPN1-208ENST00000497415 ERVK-6Q9BXR3 956 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 DEFB126Q9BYW3 111 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 PHF11Q9UIL8 331 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 ZNF225Q9UK10 706 aa17.44■□□□□ 0.38
RPN1-208ENST00000497415 ZNF223Q9UK11 482 aaPredicted RBP17.44■□□□□ 0.38
RPN1-208ENST00000497415 FLNBO75369 2602 aaKnown RBP17.43■□□□□ 0.38
RPN1-208ENST00000497415 ANKUB1A6NFN9 424 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 LDB3O75112 727 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 EEDO75530 441 aaKnown RBP17.43■□□□□ 0.38
RPN1-208ENST00000497415 IMPDH1P20839 514 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 HNRNPH2P55795 449 aaKnown RBP17.43■□□□□ 0.38
RPN1-208ENST00000497415 IGLV3-21P80748 117 aaPredicted RBP17.43■□□□□ 0.38
RPN1-208ENST00000497415 CLCQ05315 142 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 STX4Q12846 297 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 EIF2S3LQ2VIR3 472 aaKnown RBP17.43■□□□□ 0.38
RPN1-208ENST00000497415 ZNF766Q5HY98 468 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 ZNF678Q5SXM1 525 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 FHL5Q5TD97 284 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 LETMD1Q6P1Q0 360 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 BCORP1Q8N888 145 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 PTPMT1Q8WUK0 201 aaPredicted RBP17.43■□□□□ 0.38
RPN1-208ENST00000497415 SIGLEC12Q96PQ1 595 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 SLX1AQ9BQ83 275 aa17.43■□□□□ 0.38
RPN1-208ENST00000497415 TRIM45Q9H8W5 580 aaPredicted RBP17.43■□□□□ 0.38
RPN1-208ENST00000497415 LYARQ9NX58 379 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms