RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 KCMF1Q9P0J7 381 aa19.3■□□□□ 0.68
COL9A2-211ENST00000496215 FBXW2Q9UKT8 454 aa19.3■□□□□ 0.68
COL9A2-211ENST00000496215 FOXE1O00358 373 aaPredicted RBP19.29■□□□□ 0.68
COL9A2-211ENST00000496215 CTNSO60931 367 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 GSTA1P08263 222 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 PYGBP11216 843 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 CPN2P22792 545 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 PPP2R1BP30154 601 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 HERVK_113P63132 956 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 STX4Q12846 297 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 CUL3Q13618 768 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 UBAP2LQ14157 1087 aaKnown RBP19.29■□□□□ 0.68
COL9A2-211ENST00000496215 ELAVL1Q15717 326 aaKnown RBP19.29■□□□□ 0.68
COL9A2-211ENST00000496215 C10orf62Q5T681 223 aaPredicted RBP19.29■□□□□ 0.68
COL9A2-211ENST00000496215 FRG2Q64ET8 278 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 RPS27LQ71UM5 84 aaKnown RBP19.29■□□□□ 0.68
COL9A2-211ENST00000496215 ZCCHC7Q8N3Z6 543 aaKnown RBP19.29■□□□□ 0.68
COL9A2-211ENST00000496215 NFAM1Q8NET5 270 aaPredicted RBP19.29■□□□□ 0.68
COL9A2-211ENST00000496215 B3GNT7Q8NFL0 401 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 OR4F6Q8NGB9 312 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 GRHL3Q8TE85 626 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 FRG2BQ96QU4 278 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 NPAS2Q99743 824 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 ERVK-6Q9BXR3 956 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 PHF11Q9UIL8 331 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 CLDN16Q9Y5I7 305 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 HIVEP3Q5T1R4 2406 aa19.29■□□□□ 0.68
COL9A2-211ENST00000496215 SMIM23A6NLE4 172 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 GABRR3A8MPY1 467 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 CYSRT1A8MQ03 144 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 PRAMEF2O60811 474 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 IFNA16P05015 189 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 SLCO1A2P46721 670 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 NEK2P51955 445 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 TNFRSF17Q02223 184 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 IFT88Q13099 833 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 SLAMF1Q13291 335 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 NUDT13Q86X67 352 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 SERPINI1Q99574 410 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 UTP23Q9BRU9 249 aaKnown RBP19.28■□□□□ 0.68
COL9A2-211ENST00000496215 ELOVL6Q9H5J4 265 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 MS4A12Q9NXJ0 267 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 PSD3Q9NYI0 1048 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 PPT2Q9UMR5 302 aa19.28■□□□□ 0.68
COL9A2-211ENST00000496215 ESPL1Q14674 2120 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 TRBV11-1A0A0K0K1C0 115 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 ZNF500O60304 480 aaPredicted RBP19.27■□□□□ 0.68
COL9A2-211ENST00000496215 MAN1A2O60476 641 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 GLRA3O75311 464 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 SEMA3DO95025 777 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 ETHE1O95571 254 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 KRT15P19012 456 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 ATP5F1P24539 256 aaPredicted RBP19.27■□□□□ 0.68
COL9A2-211ENST00000496215 CLCN2P51788 898 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 TUBA3CQ13748 450 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 SERTAD2Q14140 314 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 TUBA3EQ6PEY2 450 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 MILR1Q7Z6M3 343 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 RPS19BP1Q86WX3 136 aaKnown RBP19.27■□□□□ 0.68
COL9A2-211ENST00000496215 TDRPQ86YL5 185 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 FAM26EQ8N5C1 309 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 BCORP1Q8N888 145 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 APCDD1LQ8NCL9 501 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 EPS8L3Q8TE67 593 aaKnown RBP19.27■□□□□ 0.68
COL9A2-211ENST00000496215 MTFMTQ96DP5 389 aaKnown RBP19.27■□□□□ 0.68
COL9A2-211ENST00000496215 VMP1Q96GC9 406 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 TMEM237Q96Q45 408 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 ZNF717Q9BY31 904 aaPredicted RBP19.27■□□□□ 0.68
COL9A2-211ENST00000496215 DEFB126Q9BYW3 111 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 CDCP1Q9H5V8 836 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 LYARQ9NX58 379 aaKnown RBP19.27■□□□□ 0.68
COL9A2-211ENST00000496215 ANKRD10Q9NXR5 420 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 TRPS1Q9UHF7 1281 aa19.27■□□□□ 0.68
COL9A2-211ENST00000496215 SPTAN1Q13813 2472 aaKnown RBP19.27■□□□□ 0.67
COL9A2-211ENST00000496215 DLX3O60479 287 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 LDB3O75112 727 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 SUPT7LO94864 414 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 TSPAN8P19075 237 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 BUD31P41223 144 aaPredicted RBP19.26■□□□□ 0.67
COL9A2-211ENST00000496215 CDH13P55290 713 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 VSNL1P62760 191 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 CLCQ05315 142 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 ELOAQ14241 798 aaKnown RBP19.26■□□□□ 0.67
COL9A2-211ENST00000496215 ZNF678Q5SXM1 525 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 LETMD1Q6P1Q0 360 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 CYP20A1Q6UW02 462 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 GPR180Q86V85 440 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 SLC22A9Q8IVM8 553 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 TMEM132CQ8N3T6 1108 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 OR14A16Q8NHC5 309 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 TRPC4APQ8TEL6 797 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 DAZLQ92904 295 aaKnown RBP19.26■□□□□ 0.67
COL9A2-211ENST00000496215 NCLNQ969V3 563 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 ALOXE3Q9BYJ1 711 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 OLAHQ9NV23 265 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 DCDC2Q9UHG0 476 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 PPIEQ9UNP9 301 aaKnown RBP19.26■□□□□ 0.67
COL9A2-211ENST00000496215 STK38LQ9Y2H1 464 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 CLCA3PQ9Y6N3 262 aa19.26■□□□□ 0.67
COL9A2-211ENST00000496215 A0A0A6YYD5 115 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms