RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 GADD45GO95257 159 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 ACP5P13686 325 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 NR4A1P22736 598 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 ACVR2AP27037 513 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 WASP42768 502 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 HMGA2P52926 109 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 RAB15P59190 212 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 TRA2BP62995 288 aaKnown RBP10.54□□□□□ -0.72
CMSS1-208ENST00000496116 TEKQ02763 1124 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 OCA2Q04671 838 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 IRF4Q15306 451 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 SPDYE7PQ495Y7 208 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 MLIPQ5VWP3 458 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 FAM180BQ6P0A1 224 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 UBE2Q1Q7Z7E8 422 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 DRAXINQ8NBI3 349 aaPredicted RBP10.54□□□□□ -0.72
CMSS1-208ENST00000496116 TRUB1Q8WWH5 349 aaKnown RBP10.54□□□□□ -0.72
CMSS1-208ENST00000496116 MYDGFQ969H8 173 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PSD2Q9BQI7 771 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 A4GALTQ9NPC4 353 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PLCXD1Q9NUJ7 323 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 TMEM184CQ9NVA4 438 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 HCN4Q9Y3Q4 1203 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 DGKBQ9Y6T7 804 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 ENPP4Q9Y6X5 453 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 ARRDC5A6NEK1 342 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 ANTXRLA6NF34 631 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 M0R3G1 203 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 MAN1A2O60476 641 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 CLEC3AO75596 197 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PAK4O96013 591 aaPredicted RBP10.54□□□□□ -0.72
CMSS1-208ENST00000496116 BCHEP06276 602 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 GRK3P35626 688 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 FRKP42685 505 aaPredicted RBP10.54□□□□□ -0.72
CMSS1-208ENST00000496116 SERPINB10P48595 397 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 MASP1P48740 699 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 RAB28P51157 221 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 BMXP51813 675 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PCBP4P57723 403 aaKnown RBP10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PRDX1Q06830 199 aaKnown RBP10.54□□□□□ -0.72
CMSS1-208ENST00000496116 HSPB3Q12988 150 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 SGCGQ13326 291 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 ENPP2Q13822 863 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 DGCR6Q14129 220 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 KRT33BQ14525 404 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 DUS1LQ6P1R4 473 aaKnown RBP10.54□□□□□ -0.72
CMSS1-208ENST00000496116 LINC00299Q6ZSB3 139 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 ZNF605Q86T29 641 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 TAGAPQ8N103 731 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PARP8Q8N3A8 854 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 ZNF513Q8N8E2 541 aaPredicted RBP10.54□□□□□ -0.72
CMSS1-208ENST00000496116 RASSF5Q8WWW0 418 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 UBE2FQ969M7 185 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 YIPF6Q96EC8 236 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PLEKHA8Q96JA3 519 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 NIPSNAP1Q9BPW8 284 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 TIMM29Q9BSF4 260 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 COPS4Q9BT78 406 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 RMI1Q9H9A7 625 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 CERS4Q9HA82 394 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 ACER3Q9NUN7 267 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 LMCD1Q9NZU5 365 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PLXND1Q9Y4D7 1925 aa10.54□□□□□ -0.72
CMSS1-208ENST00000496116 PRAMEF25A6NGN4 478 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 J3KTA2 159 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 KCNJ13O60928 360 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 VIPP01282 170 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 ZNF12P17014 697 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 LIMS1P48059 325 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 GSSP48637 474 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 IDH2P48735 452 aaKnown RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 RPS21P63220 83 aaKnown RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 CSNK1G2P78368 415 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 DGUOKQ16854 277 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 CYP27C1Q4G0S4 372 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 ZNF776Q68DI1 518 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 OR4C11Q6IEV9 310 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 KIAA1161Q6NSJ0 714 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 TNFAIP8L2Q6P589 184 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 C6orf120Q7Z4R8 191 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 HORMAD2Q8N7B1 307 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 LINC01555Q8NAE3 123 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 TP53I13Q8NBR0 393 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 DENND6BQ8NEG7 585 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 UTP15Q8TED0 518 aaKnown RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 SLC38A5Q8WUX1 472 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 PROX1Q92786 737 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 DNASE1L2Q92874 299 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 EXOSC8Q96B26 276 aaKnown RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 CHFRQ96EP1 664 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 INSM2Q96T92 566 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 CDCA3Q99618 268 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 NRTNQ99748 197 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 RHNO1Q9BSD3 238 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 DDX31Q9H8H2 851 aaKnown RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 SLAMF7Q9NQ25 335 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 ACSS1Q9NUB1 689 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 IMP3Q9NV31 184 aaKnown RBP10.53□□□□□ -0.72
CMSS1-208ENST00000496116 RLIMQ9NVW2 624 aa10.53□□□□□ -0.72
CMSS1-208ENST00000496116 IMPAD1Q9NX62 359 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms