RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 CLDN16Q9Y5I7 305 aa11.21□□□□□ -0.61
APTX-233ENST00000496030 PTGDR2Q9Y5Y4 395 aa11.21□□□□□ -0.61
APTX-233ENST00000496030 NUP210LQ5VU65 1888 aa11.21□□□□□ -0.62
APTX-233ENST00000496030 ZNF891A8MT65 544 aaPredicted RBP11.2□□□□□ -0.62
APTX-233ENST00000496030 NPIPB8E9PQR5 432 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 B3GALT2O43825 422 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 TMPRSS11DO60235 418 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 RNH1P13489 461 aaKnown RBP11.2□□□□□ -0.62
APTX-233ENST00000496030 IL10P22301 178 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 TPP2P29144 1249 aaPredicted RBP11.2□□□□□ -0.62
APTX-233ENST00000496030 TSFMP43897 325 aaKnown RBP11.2□□□□□ -0.62
APTX-233ENST00000496030 HNRNPFP52597 415 aaKnown RBP11.2□□□□□ -0.62
APTX-233ENST00000496030 PPP2R2AP63151 447 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 SKP1P63208 163 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 RAE1P78406 368 aaKnown RBP11.2□□□□□ -0.62
APTX-233ENST00000496030 PHEXP78562 749 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 HMGCS1Q01581 520 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 RHAGQ02094 409 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 OCA2Q04671 838 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 TGM3Q08188 693 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 SSPNQ14714 243 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 COMMD6Q7Z4G1 85 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 ZCCHC7Q8N3Z6 543 aaKnown RBP11.2□□□□□ -0.62
APTX-233ENST00000496030 TMEM52Q8NDY8 209 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 OR2T11Q8NH01 316 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 PPP1R14CQ8TAE6 165 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 SREK1Q8WXA9 508 aaKnown RBP11.2□□□□□ -0.62
APTX-233ENST00000496030 TBC1D20Q96BZ9 403 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 OR1F2PQ96R84 312 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 YIPF2Q9BWQ6 316 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 ROGDIQ9GZN7 287 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 VN1R1Q9GZP7 353 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 ADNPQ9H2P0 1102 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 ACBD3Q9H3P7 528 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 LYRM4Q9HD34 91 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 C14orf105Q9NVL8 296 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 DAPP1Q9UN19 280 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.2□□□□□ -0.62
APTX-233ENST00000496030 PADI2Q9Y2J8 665 aa11.2□□□□□ -0.62
APTX-233ENST00000496030 ITPR3Q14573 2671 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 POLQO75417 2590 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 IDSB3KWA1 339 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 SOCS6O14544 535 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 KLF11O14901 512 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 GBAP04062 536 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 JUNP05412 331 aaKnown RBP11.19□□□□□ -0.62
APTX-233ENST00000496030 FHP07954 510 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 MMP11P24347 488 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 FOLR3P41439 243 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 SSR2P43308 183 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 RAP1GDS1P52306 607 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 EMP2P54851 167 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 HNRNPH2P55795 449 aaKnown RBP11.19□□□□□ -0.62
APTX-233ENST00000496030 POLE2P56282 527 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 RAB38P57729 211 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 BTG2P78543 158 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 OCRLQ01968 901 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 CDC20Q12834 499 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 SLAMF1Q13291 335 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 KCNAB2Q13303 367 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 KIAA0040Q15053 153 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 TUBB8Q3ZCM7 444 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 SH2D4BQ5SQS7 431 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 GALNT18Q6P9A2 607 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 TMEM205Q6UW68 189 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 KIRREL2Q6UWL6 708 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 C1orf52Q8N6N3 182 aaKnown RBP11.19□□□□□ -0.62
APTX-233ENST00000496030 AMER2Q8N7J2 671 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 ZNF781Q8N8C0 355 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 ZSCAN1Q8NBB4 408 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 PLPP5Q8NEB5 264 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 RAB3IL1Q8TBN0 382 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 AGR3Q8TD06 166 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 ZNF75CPQ92670 426 aaPredicted RBP11.19□□□□□ -0.62
APTX-233ENST00000496030 APIPQ96GX9 242 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 C3orf30Q96M34 536 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 CSF3RQ99062 836 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 RBCK1Q9BYM8 510 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 MANSC1Q9H8J5 431 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 SIRT5Q9NXA8 310 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 ANAPC2Q9UJX6 822 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 C3orf18Q9UK00 162 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 ADAM29Q9UKF5 820 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 MKL2Q9ULH7 1088 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 RAP2CQ9Y3L5 183 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 ATG4BQ9Y4P1 393 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 HS3ST3B1Q9Y662 390 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 RP1L1Q8IWN7 2480 aaPredicted RBP11.19□□□□□ -0.62
APTX-233ENST00000496030 CSMD1Q96PZ7 3565 aa11.19□□□□□ -0.62
APTX-233ENST00000496030 LOC102723996A0A087X1L8 192 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 A0A088AWK7 358 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 IGKV3D-11A0A0A0MRZ8 115 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 A0A1W2PQ72 361 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 A0A1W2PR48 441 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 CDC14CA4D256 554 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 WASHC1A8K0Z3 465 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 TGFBR3LH3BV60 316 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 DYNC1I1O14576 645 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 PIP5K1BO14986 540 aa11.18□□□□□ -0.62
APTX-233ENST00000496030 PROM1O43490 865 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms