RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 AP1B1Q10567 949 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 ELAVL2Q12926 359 aaKnown RBP2.3□□□□□ -2.04
LRIF1-203ENST00000494675 FCN2Q15485 313 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 STX1AQ16623 288 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 SLC10A5Q5PT55 438 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 CACUL1Q86Y37 369 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 CCDC197Q8NCU1 140 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 C8orf46Q8TAG6 207 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 LIPHQ8WWY8 451 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 ATP6V0A1Q93050 837 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 ZNF689Q96CS4 500 aaPredicted RBP2.3□□□□□ -2.04
LRIF1-203ENST00000494675 SLC45A3Q96JT2 553 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 PRICKLE1Q96MT3 831 aaPredicted RBP2.3□□□□□ -2.04
LRIF1-203ENST00000494675 VGLL1Q99990 258 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 PINK1Q9BXM7 581 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 GFRA4Q9GZZ7 299 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 TSPYL1Q9H0U9 437 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 PLEKHA3Q9HB20 300 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 IL1RAPQ9NPH3 570 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 ZCCHC3Q9NUD5 404 aaKnown RBP2.3□□□□□ -2.04
LRIF1-203ENST00000494675 FOXA2Q9Y261 457 aaPredicted RBP2.3□□□□□ -2.04
LRIF1-203ENST00000494675 MOB4Q9Y3A3 225 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 OR1A2Q9Y585 309 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 PRSS21Q9Y6M0 314 aa2.3□□□□□ -2.04
LRIF1-203ENST00000494675 IGHV3-20A0A0C4DH32 117 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 ATP6AP2A0A1C7CYW4 349 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 A8MXK9 166 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 TMCO5BA8MYB1 307 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 E9PQ18 207 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 SOCS3O14543 225 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 ATP6V1G1O75348 118 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 STBD1O95210 358 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 POP4O95707 220 aaKnown RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CD1DP15813 335 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 FCGR2BP31994 310 aaPredicted RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 FCGR2CP31995 323 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 OR1D2P34982 312 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CAPGP40121 348 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CCR4P51679 360 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 PEX3P56589 373 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 GALK2Q01415 458 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 GFPT1Q06210 699 aaPredicted RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CBX3Q13185 183 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 LASP1Q14847 261 aaKnown RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 KRT31Q15323 416 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 MLF2Q15773 248 aaPredicted RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 UPP1Q16831 310 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 KNOP1Q1ED39 458 aaKnown RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 ZNF772Q68DY9 489 aaPredicted RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 FBXW8Q8N3Y1 598 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 UBTD2Q8WUN7 234 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 GAL3ST4Q96RP7 486 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 SSX3Q99909 188 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 FAM213AQ9BRX8 229 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CABLES2Q9BTV7 478 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 NTMT1Q9BV86 223 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 LRRC61Q9BV99 259 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 PARLQ9H300 379 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 WDR41Q9HAD4 459 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 UMODL1Q5DID0 1318 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 IGHV4-30-2A0A087WSY4 118 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 IGHV3-38A0A0C4DH36 116 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 SHISA7A6NL88 538 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 SRRM4A7MD48 611 aaKnown RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 OGTO15294 1046 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 ZNF749O43361 778 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 PRDM1O75626 825 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CPNE6O95741 557 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 SELEP16581 610 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 UGT1A6P19224 532 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 FHITP49789 147 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 TNFSF10P50591 281 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CRYBA2P53672 197 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 FKBP3Q00688 224 aaKnown RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 MS4A2Q01362 244 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 PDE7AQ13946 482 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 LY6DQ14210 128 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 HEPACAMQ14CZ8 416 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 ZNF146Q15072 292 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 ECSCRQ19T08 205 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CAPN13Q6MZZ7 669 aaPredicted RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 METTL7BQ6UX53 244 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 B3GLCTQ6Y288 498 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CDHR3Q6ZTQ4 885 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 FAM131BQ86XD5 332 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 KRTAP7-1Q8IUC3 87 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 TBC1D10CQ8IV04 446 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 STHQ8IWL8 128 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CNTN4Q8IWV2 1026 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 PEX5LQ8IYB4 626 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 ZNF440Q8IYI8 595 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 SIDT2Q8NBJ9 832 aaKnown RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 PRSS33Q8NF86 280 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 SPPL2AQ8TCT8 520 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 MIPOL1Q8TD10 442 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 LRRC15Q8TF66 581 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 NPRL2Q8WTW4 380 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.29□□□□□ -2.04
LRIF1-203ENST00000494675 EEF2KMTQ96G04 330 aa2.29□□□□□ -2.04
LRIF1-203ENST00000494675 CXorf58Q96LI9 332 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms