RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 AGR3Q8TD06 166 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 TSLPQ969D9 159 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 UBL7Q96S82 380 aaPredicted RBP11.73□□□□□ -0.53
TRA2A-209ENST00000494255 CSF3RQ99062 836 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 WDR41Q9HAD4 459 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 ATP13A2Q9NQ11 1180 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 RIC8BQ9NVN3 520 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 EPG5Q9HCE0 2579 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 LOC102723996A0A087X1L8 192 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 IGHV1-45A0A0A0MS14 117 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 SYNDIG1LA6NDD5 238 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 TMPRSS11DO60235 418 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 GUCY1B2O75343 617 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 GBAP04062 536 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 FGF4P08620 206 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 MAOAP21397 527 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 SLC1A6P48664 564 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 CCL11P51671 97 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 EFNA3P52797 238 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 OR4D2P58180 307 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 BTG2P78543 158 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 TNFRSF17Q02223 184 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 BTKQ06187 659 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 TBL3Q12788 808 aaKnown RBP11.72□□□□□ -0.53
TRA2A-209ENST00000494255 AIMP2Q13155 320 aaKnown RBP11.72□□□□□ -0.53
TRA2A-209ENST00000494255 LINC00303Q3SY05 128 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 IRAK1BP1Q5VVH5 260 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 LANCL3Q6ZV70 420 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 TRIM46Q7Z4K8 759 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 SCUBE1Q8IWY4 988 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 DDIASQ8IXT1 998 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 KIRREL3Q8IZU9 778 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 CHTF18Q8WVB6 975 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 WBP1Q96G27 269 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 ZNF700Q9H0M5 742 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 ADNPQ9H2P0 1102 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 PFDN4Q9NQP4 134 aa11.72□□□□□ -0.53
TRA2A-209ENST00000494255 A0A1W2PQ72 361 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 TMEM233B4DJY2 109 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 MKRN2OSH3BPM6 223 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 PROM1O43490 865 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 RGS14O43566 566 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 LYPLA1O75608 230 aaPredicted RBP11.71□□□□□ -0.53
TRA2A-209ENST00000494255 RSL1D1O76021 490 aaKnown RBP11.71□□□□□ -0.53
TRA2A-209ENST00000494255 NR2F6P10588 404 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 SFTPCP11686 197 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 COX6A1P12074 109 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 TPP2P29144 1249 aaPredicted RBP11.71□□□□□ -0.53
TRA2A-209ENST00000494255 PPP2R1BP30154 601 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 AP2B1P63010 937 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 SFT2D3Q587I9 215 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 ATG16L1Q676U5 607 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 RNF165Q6ZSG1 346 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 CLNKQ7Z7G1 428 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 TMEM52Q8NDY8 209 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 C7orf57Q8NEG2 295 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 RAB3IL1Q8TBN0 382 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 TWIST2Q8WVJ9 160 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 TANKQ92844 425 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 MESP1Q9BRJ9 268 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 TUBB6Q9BUF5 446 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 TRIM55Q9BYV6 548 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 ILKAPQ9H0C8 392 aaPredicted RBP11.71□□□□□ -0.53
TRA2A-209ENST00000494255 RPF2Q9H7B2 306 aaKnown RBP11.71□□□□□ -0.53
TRA2A-209ENST00000494255 ZNF160Q9HCG1 818 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 NECTIN3Q9NQS3 549 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 MCM8Q9UJA3 840 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.71□□□□□ -0.53
TRA2A-209ENST00000494255 ATG4BQ9Y4P1 393 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 ASB4Q9Y574 426 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 DNAJC15Q9Y5T4 150 aa11.71□□□□□ -0.53
TRA2A-209ENST00000494255 PCSK5Q92824 1860 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 IGKV3D-11A0A0A0MRZ8 115 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 GNG14A0A1W2PPG7 69 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 TCRBV16S1A1N1A0A5B0 115 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 A6NL46 340 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 ITM2AO43736 263 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 PCDH7O60245 1069 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 KLHL41O60662 606 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 CTNSO60931 367 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 DNAJB5O75953 348 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 MYO1DO94832 1006 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 SEC24DO94855 1032 aaPredicted RBP11.71□□□□□ -0.54
TRA2A-209ENST00000494255 FAM87AP0C7U9 286 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 LINC00032P0C843 101 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 ICAM2P13598 275 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 ITGA3P26006 1051 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 ARRB2P32121 409 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 HNRNPFP52597 415 aaKnown RBP11.71□□□□□ -0.54
TRA2A-209ENST00000494255 TRA2BP62995 288 aaKnown RBP11.71□□□□□ -0.54
TRA2A-209ENST00000494255 STX4Q12846 297 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 KCNAB2Q13303 367 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 SERTAD2Q14140 314 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 PCOLCEQ15113 449 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 PARP9Q8IXQ6 854 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 APIPQ96GX9 242 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 LPAR4Q99677 370 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 ZNF446Q9NWS9 450 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 ZDHHC2Q9UIJ5 367 aa11.71□□□□□ -0.54
TRA2A-209ENST00000494255 TUBD1Q9UJT1 453 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms