RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 C3orf30Q96M34 536 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 RILPQ96NA2 401 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 CCNL2Q96S94 520 aaPredicted RBP7.17□□□□□ -1.26
VEGFA-214ENST00000493786 C1orf50Q9BV19 199 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 ZNF717Q9BY31 904 aaPredicted RBP7.17□□□□□ -1.26
VEGFA-214ENST00000493786 RPF2Q9H7B2 306 aaKnown RBP7.17□□□□□ -1.26
VEGFA-214ENST00000493786 AKTIPQ9H8T0 292 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 AKIRIN1Q9H9L7 192 aaPredicted RBP7.17□□□□□ -1.26
VEGFA-214ENST00000493786 NPHS2Q9NP85 383 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 MIEF1Q9NQG6 463 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 PRTFDC1Q9NRG1 225 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 SEMA3GQ9NS98 782 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 SLC22A11Q9NSA0 550 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 GIMAP4Q9NUV9 329 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 SIRT5Q9NXA8 310 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 C19orf25Q9UFG5 118 aaPredicted RBP7.17□□□□□ -1.26
VEGFA-214ENST00000493786 C3orf18Q9UK00 162 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 PSME2Q9UL46 239 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 TCFL5Q9UL49 500 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 WBP11Q9Y2W2 641 aaKnown RBP7.17□□□□□ -1.26
VEGFA-214ENST00000493786 MMACHCQ9Y4U1 282 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 CCL27Q9Y4X3 112 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 PCDHGA6Q9Y5G7 932 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 CEP295Q9C0D2 2601 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 NCOR2Q9Y618 2525 aa7.17□□□□□ -1.26
VEGFA-214ENST00000493786 SPTBP11277 2137 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 A0A0G2JND7 137 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 C1orf226A1L170 272 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 VSTM2BA6NLU5 285 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 IDSB3KWA1 339 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 PEX12O00623 359 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 SDHDO14521 159 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 PROM1O43490 865 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 DYRK3O43781 588 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 CREG1O75629 220 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 AIFM1O95831 613 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 JUNP05412 331 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 IL3P08700 152 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 C8orf89P0DMQ9 161 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 COX7A2P14406 83 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 DRD2P14416 443 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 ALOX15P16050 662 aaPredicted RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 PIK3R1P27986 724 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 EPHA3P29320 983 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 OTX2P32243 289 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 LSP1P33241 339 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 HPCAL1P37235 193 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 RPL3P39023 403 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 EIF2S3P41091 472 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 GYS2P54840 703 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 HNRNPH2P55795 449 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 HSD17B7P56937 341 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 STX1BP61266 288 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 RPS18P62269 152 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 RAE1P78406 368 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 EMX2Q04743 252 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 ACTN3Q08043 901 aaPredicted RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 STX4Q12846 297 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 SERTAD2Q14140 314 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 ERV3-1Q14264 604 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 SSPNQ14714 243 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 RPS6KA2Q15349 733 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 NSDHLQ15738 373 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 SLC9B1Q4ZJI4 515 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 RFTN2Q52LD8 501 aaPredicted RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 NDUFAF5Q5TEU4 345 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 C6orf163Q5TEZ5 329 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 VWA5B1Q5TIE3 1220 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 IL23RQ5VWK5 629 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 FAAH2Q6GMR7 532 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 MRM1Q6IN84 353 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 EPGNQ6UW88 154 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 CCDC81Q6ZN84 652 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 QSOX2Q6ZRP7 698 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 R3HCC1LQ7Z5L2 792 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 SPATA19Q7Z5L4 167 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 MTERF4Q7Z6M4 381 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 CPLX4Q7Z7G2 160 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 SPACA3Q8IXA5 215 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 SAMD14Q8IZD0 417 aaPredicted RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 LIX1Q8N485 282 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 ACTRT2Q8TDY3 377 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 C16orf78Q8WTQ4 265 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 NACC2Q96BF6 587 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 THOC1Q96FV9 657 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 SLC45A3Q96JT2 553 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 PTCHD1Q96NR3 888 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 IP6K3Q96PC2 410 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 TSSK3Q96PN8 268 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 CSF3RQ99062 836 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 SPSB2Q99619 263 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 PRPF18Q99633 342 aaKnown RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 TMEM121BQ9BXQ6 578 aaPredicted RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 VN1R1Q9GZP7 353 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 FAM107BQ9H098 131 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 WDR55Q9H6Y2 383 aaPredicted RBP7.16□□□□□ -1.26
VEGFA-214ENST00000493786 MYNNQ9NPC7 610 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 TCF7L2Q9NQB0 619 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 PRDM9Q9NQV7 894 aa7.16□□□□□ -1.26
VEGFA-214ENST00000493786 KCMF1Q9P0J7 381 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms