RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 AK5Q9Y6K8 562 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 PCNX2A6NKB5 2137 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 IGLV3-12A0A075B6K2 115 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 A0A0G2JN53 185 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 C1orf226A1L170 272 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 E9PBE3 544 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 NDUFAB1O14561 156 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 PCDH17O14917 1159 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 SLC22A2O15244 555 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 PROM1O43490 865 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 KLHL41O60662 606 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 MED26O95402 600 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 NR2F6P10588 404 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 SDC1P18827 310 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 ITGAXP20702 1163 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 CPN2P22792 545 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 ADSLP30566 484 aaPredicted RBP11.74□□□□□ -0.53
SNX17-208ENST00000493711 HPCAL1P37235 193 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 CLNS1AP54105 237 aaKnown RBP11.74□□□□□ -0.53
SNX17-208ENST00000493711 LIM2P55344 173 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 C21orf58P58505 322 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 SHC2P98077 582 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 KLC1Q07866 573 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 RUNX2Q13950 521 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 PDCD4Q53EL6 469 aaKnown RBP11.74□□□□□ -0.53
SNX17-208ENST00000493711 C1orf189Q5VU69 101 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 ZNF385CQ66K41 422 aaPredicted RBP11.74□□□□□ -0.53
SNX17-208ENST00000493711 ZNF517Q6ZMY9 492 aaPredicted RBP11.74□□□□□ -0.53
SNX17-208ENST00000493711 OVCH1Q7RTY7 1134 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 PRSS41Q7RTY9 318 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 ZNF595Q8IYB9 648 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 NLGN4XQ8N0W4 816 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 MIER2Q8N344 545 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 LIX1Q8N485 282 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 AMER3Q8N944 861 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 SLC38A9Q8NBW4 561 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 GLB1L3Q8NCI6 653 aaPredicted RBP11.74□□□□□ -0.53
SNX17-208ENST00000493711 GALNT6Q8NCL4 622 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 NLGN4YQ8NFZ3 816 aaPredicted RBP11.74□□□□□ -0.53
SNX17-208ENST00000493711 OR51Q1Q8NH59 317 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 C16orf78Q8WTQ4 265 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 TANKQ92844 425 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 MR1Q95460 341 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 TBC1D20Q96BZ9 403 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 TM4SF18Q96CE8 201 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 ZBTB18Q99592 522 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 C1orf50Q9BV19 199 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 SORBS1Q9BX66 1292 aaKnown RBP11.74□□□□□ -0.53
SNX17-208ENST00000493711 BRINP2Q9C0B6 783 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 SDR39U1Q9NRG7 319 aaPredicted RBP11.74□□□□□ -0.53
SNX17-208ENST00000493711 ZIM2Q9NZV7 527 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 KCMF1Q9P0J7 381 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 TRPC4Q9UBN4 977 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 DLGAP4Q9Y2H0 992 aa11.74□□□□□ -0.53
SNX17-208ENST00000493711 PMS2P1A4D2B8 440 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 TRABD2BA6NFA1 517 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 ZNF860A6NHJ4 632 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 C21orf140B9A014 251 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 TMPRSS11DO60235 418 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 TBX19O60806 448 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 DCTN3O75935 186 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 FHP07954 510 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 RAB40ALP0C0E4 278 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 G6PDP11413 515 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 ZNF28P17035 718 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 NCF2P19878 526 aaPredicted RBP11.73□□□□□ -0.53
SNX17-208ENST00000493711 DDCP20711 480 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 XCR1P46094 333 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 OR1D4P47884 311 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 CLDN8P56748 225 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 HSD17B7P56937 341 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 TAS2R50P59544 299 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 TNFRSF17Q02223 184 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 SQLEQ14534 574 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 DPY19L1Q2PZI1 675 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 NDUFAF5Q5TEU4 345 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 OR52E8Q6IFG1 317 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 FAM71E1Q6IPT2 247 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 CCDC197Q8NCU1 140 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.73□□□□□ -0.53
SNX17-208ENST00000493711 BCAS4Q8TDM0 211 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 MIEF2Q96C03 454 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 MAPKAP1Q9BPZ7 522 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 EFHD1Q9BUP0 239 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 YIPF2Q9BWQ6 316 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 GPR87Q9BY21 358 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 DPY30Q9C005 99 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 RPF2Q9H7B2 306 aaKnown RBP11.73□□□□□ -0.53
SNX17-208ENST00000493711 ASCL3Q9NQ33 180 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 MIEF1Q9NQG6 463 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 ATAD3AQ9NVI7 634 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 TAS2R7Q9NYW3 318 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 FOXJ2Q9P0K8 574 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 HCN3Q9P1Z3 774 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 GIMAP2Q9UG22 337 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 KLK13Q9UKR3 277 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 FBXW2Q9UKT8 454 aa11.73□□□□□ -0.53
SNX17-208ENST00000493711 WASF3Q9UPY6 502 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms