RNA–Protein interactions for RNA: ENST00000493588.5

NUB1-210, Transcript of negative regulator of ubiquitin like proteins 1, human

TSL 3

Gene NUB1, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUB1-210	ENST00000493588	RPS19BP1	Q86WX3	136 aa	Known RBP	13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	ZNF321P	Q8N8H1	164 aa		13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	MDS2	Q8NDY4	140 aa		13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	PSMG3-AS1	Q96PY0	264 aa		13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	MRPL46	Q9H2W6	279 aa	Known RBP	13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	ANKZF1	Q9H8Y5	726 aa		13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	LYRM4	Q9HD34	91 aa		13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	TEKT2	Q9UIF3	430 aa		13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	FBXW2	Q9UKT8	454 aa		13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	PPIE	Q9UNP9	301 aa	Known RBP	13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	PCDHGA11	Q9Y5H2	935 aa		13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	POLE	Q07864	2286 aa		13.72	□□□□□ -0.21
NUB1-210	ENST00000493588	HIVEP3	Q5T1R4	2406 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588		A0A088AWK7	358 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	ANKUB1	A6NFN9	424 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	GABRR3	A8MPY1	467 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	CLDN4	O14493	209 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	TMPRSS11D	O60235	418 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	UGDH	O60701	494 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	PRAMEF2	O60811	474 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	NEURL1	O76050	574 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	CLDN9	O95484	217 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	ZNF10	P21506	573 aa	Predicted RBP	13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	MST1	P26927	711 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	SERPINB1	P30740	379 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	HPD	P32754	393 aa	Predicted RBP	13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	BSG	P35613	385 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	SSR2	P43308	183 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	MLF1	P58340	268 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	PMP22	Q01453	160 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	TGM3	Q08188	693 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	AP5B1	Q2VPB7	878 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	TEX35	Q5T0J7	233 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	FHL5	Q5TD97	284 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	MRM1	Q6IN84	353 aa	Known RBP	13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	DGAT2L6	Q6ZPD8	337 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	OR4N5	Q8IXE1	308 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	ST6GALNAC3	Q8NDV1	305 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	SRFBP1	Q8NEF9	429 aa	Known RBP	13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	ARMC2	Q8NEN0	867 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	B3GNT7	Q8NFL0	401 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	ZNF483	Q8TF39	744 aa	Predicted RBP	13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	THAP3	Q8WTV1	239 aa	Predicted RBP	13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	RGMA	Q96B86	450 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	SLX1A	Q9BQ83	275 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	NTMT1	Q9BV86	223 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	ALOXE3	Q9BYJ1	711 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	LIN28A	Q9H9Z2	209 aa	Known RBP	13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	AGPAT4	Q9NRZ5	378 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	VTI1B	Q9UEU0	232 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	TBK1	Q9UHD2	729 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	ADGRE2	Q9UHX3	823 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	ATG4B	Q9Y4P1	393 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	ASB4	Q9Y574	426 aa		13.71	□□□□□ -0.21
NUB1-210	ENST00000493588	FOXE1	O00358	373 aa	Predicted RBP	13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	FGF17	O60258	216 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	DLX3	O60479	287 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	SMIM24	O75264	130 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	GBA	P04062	536 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	PTX3	P26022	381 aa	Predicted RBP	13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	TDGF1P3	P51864	188 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	CCNG1	P51959	295 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	HNRNPH2	P55795	449 aa	Known RBP	13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	OR1C1	Q15619	314 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	UNC50	Q53HI1	259 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	ZNF766	Q5HY98	468 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	LGSN	Q5TDP6	509 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	LETMD1	Q6P1Q0	360 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	ARMC10	Q8N2F6	343 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	SLC5A8	Q8N695	610 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	EIF1AD	Q8N9N8	165 aa	Known RBP	13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	OR4F6	Q8NGB9	312 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	ADAMTS18	Q8TE60	1221 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	SREK1	Q8WXA9	508 aa	Known RBP	13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	NCLN	Q969V3	563 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	ATP6V1E2	Q96A05	226 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	MTBP	Q96DY7	904 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	C1QTNF3	Q9BXJ4	246 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	SLC29A3	Q9BZD2	475 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	ROGDI	Q9GZN7	287 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	KLHL1	Q9NR64	748 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	FARSB	Q9NSD9	589 aa	Known RBP	13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	PSD3	Q9NYI0	1048 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	FETUB	Q9UGM5	382 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.7	□□□□□ -0.22
NUB1-210	ENST00000493588	EMCN	Q9ULC0	261 aa		13.7	□□□□□ -0.22
NUB1-210	ENST00000493588		A0A0A6YYD5	115 aa		13.69	□□□□□ -0.22
NUB1-210	ENST00000493588	TRBV11-1	A0A0K0K1C0	115 aa		13.69	□□□□□ -0.22
NUB1-210	ENST00000493588	BLACE	A4D250	179 aa		13.69	□□□□□ -0.22
NUB1-210	ENST00000493588	PROM1	O43490	865 aa		13.69	□□□□□ -0.22
NUB1-210	ENST00000493588	DDAH2	O95865	285 aa		13.69	□□□□□ -0.22
NUB1-210	ENST00000493588	CPN2	P22792	545 aa		13.69	□□□□□ -0.22
NUB1-210	ENST00000493588	HSD17B3	P37058	310 aa		13.69	□□□□□ -0.22
NUB1-210	ENST00000493588	CUL3	Q13618	768 aa		13.69	□□□□□ -0.22
NUB1-210	ENST00000493588	TERF2	Q15554	542 aa		13.69	□□□□□ -0.22
NUB1-210	ENST00000493588	MILR1	Q7Z6M3	343 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms