RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 B3GALT2O43825 422 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 NRDCO43847 1150 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 ATE1O95260 518 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 KRT14P02533 472 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 IFNA16P05015 189 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 GSTM2P28161 218 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 HPDP32754 393 aaPredicted RBP16.33■□□□□ 0.2
NUP50-218ENST00000493456 DNASE1L1P49184 302 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 HNRNPFP52597 415 aaKnown RBP16.33■□□□□ 0.2
NUP50-218ENST00000493456 KEAP1Q14145 624 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 RCN2Q14257 317 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 FBXL19-AS1Q494R0 122 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 RBM20Q5T481 1227 aaKnown RBP16.33■□□□□ 0.2
NUP50-218ENST00000493456 TAOK1Q7L7X3 1001 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.33■□□□□ 0.2
NUP50-218ENST00000493456 AGGF1Q8N302 714 aaeCLIP16.33■□□□□ 0.2
NUP50-218ENST00000493456 FAM47BQ8NA70 645 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 TMEM52Q8NDY8 209 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 OR5L2Q8NGL0 311 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 RNASE6Q93091 150 aaKnown RBP16.33■□□□□ 0.2
NUP50-218ENST00000493456 MS4A6EQ96DS6 147 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 SIGLEC10Q96LC7 697 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 SH3GL2Q99962 352 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 CNPPD1Q9BV87 410 aa16.33■□□□□ 0.2
NUP50-218ENST00000493456 TUBA8Q9NY65 449 aaPredicted RBP16.33■□□□□ 0.2
NUP50-218ENST00000493456 MTRF1LQ9UGC7 380 aaKnown RBP16.33■□□□□ 0.2
NUP50-218ENST00000493456 GOSR1O95249 250 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 CCDC175P0C221 793 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 CCL3P10147 92 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 ENDOUP21128 410 aaKnown RBP16.32■□□□□ 0.2
NUP50-218ENST00000493456 RNF4P78317 190 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 TBL3Q12788 808 aaKnown RBP16.32■□□□□ 0.2
NUP50-218ENST00000493456 CRYMQ14894 314 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 EFTUD2Q15029 972 aaKnown RBP eCLIP16.32■□□□□ 0.22e-11■■■■■ 41.9
NUP50-218ENST00000493456 FBXW10Q5XX13 1052 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 CLNKQ7Z7G1 428 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 GALNT7Q86SF2 657 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 KLHDC8AQ8IYD2 350 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 ULK2Q8IYT8 1036 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 RELL2Q8NC24 303 aaPredicted RBP16.32■□□□□ 0.2
NUP50-218ENST00000493456 WFDC11Q8NEX6 87 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 PTPMT1Q8WUK0 201 aaPredicted RBP16.32■□□□□ 0.2
NUP50-218ENST00000493456 OR8D2Q9GZM6 311 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 SPRR3Q9UBC9 169 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 VTI1BQ9UEU0 232 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 SLC22A14Q9Y267 594 aa16.32■□□□□ 0.2
NUP50-218ENST00000493456 A0A0G2JN53 185 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 LRIT2A6NDA9 550 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 CYR61O00622 381 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 CTNSO60931 367 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 PGAM1P18669 254 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 BMP5P22003 454 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 TACR1P25103 407 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 GABRB3P28472 473 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 ADSLP30566 484 aaPredicted RBP16.31■□□□□ 0.2
NUP50-218ENST00000493456 HNRNPH1P31943 449 aaKnown RBP16.31■□□□□ 0.2
NUP50-218ENST00000493456 PPP1R3AQ16821 1122 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 SBSNQ6UWP8 590 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 TMIGD1Q6UXZ0 262 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 CNTN4Q8IWV2 1026 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 QRFPRQ96P65 431 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 SERINC2Q96SA4 455 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 ZNF703Q9H7S9 590 aaPredicted RBP16.31■□□□□ 0.2
NUP50-218ENST00000493456 QPCTLQ9NXS2 382 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 COPS7AQ9UBW8 275 aa16.31■□□□□ 0.2
NUP50-218ENST00000493456 CORO1CQ9ULV4 474 aaPredicted RBP16.31■□□□□ 0.2
NUP50-218ENST00000493456 BOKQ9UMX3 212 aaPredicted RBP16.31■□□□□ 0.2
NUP50-218ENST00000493456 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.31■□□□□ 0.2
NUP50-218ENST00000493456 ARHGAP21Q5T5U3 1957 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 FAM171A2A8MVW0 826 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 TTC4O95801 387 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 AHSGP02765 367 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 INHBBP09529 407 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 GNAZP19086 355 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 HOXC12P31275 282 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 LIM2P55344 173 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 STX4Q12846 297 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 SERTAD2Q14140 314 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 MPEG1Q2M385 716 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 TRIM40Q6P9F5 258 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 MAATS1Q7Z4T9 603 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 C7orf57Q8NEG2 295 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 OR2L5Q8NG80 312 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 SLC2A12Q8TD20 617 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 CCT6BQ92526 530 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 PDLIM5Q96HC4 596 aaKnown RBP16.3■□□□□ 0.2
NUP50-218ENST00000493456 CSF3RQ99062 836 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 SMR3AQ99954 134 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 ALOXE3Q9BYJ1 711 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 REXO4Q9GZR2 422 aaKnown RBP16.3■□□□□ 0.2
NUP50-218ENST00000493456 NEUROD4Q9HD90 331 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 ZNF629Q9UEG4 869 aaPredicted RBP16.3■□□□□ 0.2
NUP50-218ENST00000493456 DAPP1Q9UN19 280 aa16.3■□□□□ 0.2
NUP50-218ENST00000493456 TUBAL3A6NHL2 446 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 C17orf105B2RV13 164 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 ZNF354AO60765 605 aaPredicted RBP16.29■□□□□ 0.2
NUP50-218ENST00000493456 H2AFYO75367 372 aaKnown RBP16.29■□□□□ 0.2
NUP50-218ENST00000493456 CLEC3AO75596 197 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 HEXAP06865 529 aa16.29■□□□□ 0.2
NUP50-218ENST00000493456 C1GALT1C1LP0DN25 315 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms