RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PPP1R3BQ86XI6 285 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PTRH1Q86Y79 214 aaKnown RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 OFCC1Q8IZS5 231 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 C19orf47Q8N9M1 422 aaKnown RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 FBXO15Q8NCQ5 510 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 OR2A1Q8NGT9 310 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 OR1L3Q8NH93 324 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 MAGEE2Q8TD90 523 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 TUBGCP3Q96CW5 907 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 NRBF2Q96F24 287 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 LINGO1Q96FE5 620 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PLEKHA8Q96JA3 519 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 ZPBPQ9BS86 351 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 AKIRIN1Q9H9L7 192 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 MID1IP1Q9NPA3 183 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 WDR70Q9NW82 654 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 ANAPC2Q9UJX6 822 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 RARRES3Q9UL19 164 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PDE10AQ9Y233 779 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PCDHB11Q9Y5F2 797 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 A0A1W2PP18 115 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 H0YAE9 185 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 H3BMH7 237 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 EIF3FO00303 357 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 RAD1O60671 282 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 SUPT3HO75486 399 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 WISP3O95389 354 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 ESRRBO95718 433 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 SLC16A8O95907 504 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 CATP04040 527 aaKnown RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 OCM2P0CE71 109 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 OCMP0CE72 109 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 CCNA2P20248 432 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 MAGP20916 626 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 MAP4P27816 1152 aaKnown RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 TMBIM6P55061 237 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 KCNK10P57789 538 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 ACY1Q03154 408 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 NFYCQ13952 458 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 NEDD8Q15843 81 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PHKG1Q16816 387 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 ZXDCQ2QGD7 858 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 DEFB110Q30KQ9 67 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 ANKDD1AQ495B1 522 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PDCD4Q53EL6 469 aaKnown RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 BLOC1S3Q6QNY0 202 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 MBOAT1Q6ZNC8 495 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 LRRC56Q8IYG6 542 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 SLC38A9Q8NBW4 561 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 GALNT6Q8NCL4 622 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PAPD5Q8NDF8 572 aaKnown RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF480Q8WV37 535 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 KCTD14Q9BQ13 255 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 BDH2Q9BUT1 245 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 C1orf50Q9BV19 199 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 ULBP3Q9BZM4 244 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PDE7BQ9NP56 450 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 SPATA7Q9P0W8 599 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 RALYQ9UKM9 306 aaKnown RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PCDHA9Q9Y5H5 950 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 FER1L5A0AVI2 2057 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 HEATR5BQ9P2D3 2071 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 LOC400499M0QZD8 3231 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 LOC101059948A0A1B0GTJ6 334 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 TMEM150CB9EJG8 249 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 BOLA2-SMG1P6H3BVE0 249 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 ALBP02768 609 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 NTRK1P04629 796 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 INHBBP09529 407 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 KCNC1P48547 511 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 GSK3BP49841 420 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 PNLIPRP1P54315 467 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 SF1Q15637 639 aaKnown RBP8.94□□□□□ -0.98
BRCA1-219ENST00000491747 KANK2Q63ZY3 851 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 USP51Q70EK9 711 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 IFNEQ86WN2 208 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 DNAJC22Q8N4W6 341 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 PTGR2Q8N8N7 351 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-219ENST00000491747 PDPRQ8NCN5 879 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 EXT2Q93063 718 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 RAB11FIP5Q9BXF6 653 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 PRORYQ9H606 182 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 TFPTP0C1Z6 253 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 CD1DP15813 335 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF37AP17032 561 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-219ENST00000491747 EEF1B2P24534 225 aaKnown RBP8.94□□□□□ -0.98
BRCA1-219ENST00000491747 IMPA1P29218 277 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 RGS4P49798 205 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 IL2P60568 153 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 CXADRP78310 365 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 PHEXP78562 749 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 TAP2Q03519 686 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 NFATC3Q12968 1075 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 TUBA3CQ13748 450 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 RCAN2Q14206 197 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 TGFBIQ15582 683 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 OGFOD2Q6N063 350 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 ANKRD26P1Q6NSI1 321 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF773Q6PK81 442 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 DCDC5Q6ZRR9 648 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms