RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CLDN8P56748 225 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 PHC1P78364 1004 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 LAIR2Q6ISS4 152 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 ZBTB46Q86UZ6 589 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 ARL10Q8N8L6 244 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 LINC01555Q8NAE3 123 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 PYURFQ96I23 114 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 ITCHQ96J02 903 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 FUNDC2Q9BWH2 189 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 DGCR6LQ9BY27 220 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 SERHLQ9NQF3 203 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 CFAP54Q96N23 3096 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 PPM1DO15297 605 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 SLC16A6O15403 523 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 GPR18Q14330 331 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 CPSF6Q16630 551 aaKnown RBP eCLIP21.69■■□□□ 1.06
USF3-203ENST00000491165 GALNT18Q6P9A2 607 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 AGTRAPQ6RW13 159 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 C17orf82Q86X59 251 aaPredicted RBP21.69■■□□□ 1.06
USF3-203ENST00000491165 LRRC56Q8IYG6 542 aaPredicted RBP21.69■■□□□ 1.06
USF3-203ENST00000491165 ARL14Q8N4G2 192 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 SLC15A4Q8N697 577 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 FKBP10Q96AY3 582 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 KIR3DX1Q9H7L2 352 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 MVB12BQ9H7P6 319 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 ICKQ9UPZ9 632 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 CSNK1G3Q9Y6M4 447 aa21.69■■□□□ 1.06
USF3-203ENST00000491165 KIR2DS5A0A0G2JLQ3 304 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 A0A0G2JNG1 304 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 KIR2DS3K7RE56 304 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 PDYNP01213 254 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 SYPP08247 313 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 ITIH1P19827 911 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 RYKP34925 604 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 PIGFQ07326 219 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 SPEM2Q0P670 501 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 KRT33BQ14525 404 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 KIR2DS5Q14953 304 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 PTCHD3Q3KNS1 767 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 ZC3H12BQ5HYM0 836 aaKnown RBP21.68■■□□□ 1.06
USF3-203ENST00000491165 C6orf132Q5T0Z8 1188 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 DCDC5Q6ZRR9 648 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 FAM9CQ8IZT9 166 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 GPR156Q8NFN8 814 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 FBXL8Q96CD0 374 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 REXO5Q96IC2 774 aaKnown RBP21.68■■□□□ 1.06
USF3-203ENST00000491165 NODALQ96S42 347 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 SLC32A1Q9H598 525 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 TMEFF2Q9UIK5 374 aaPredicted RBP21.68■■□□□ 1.06
USF3-203ENST00000491165 DLGAP4Q9Y2H0 992 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 NAALAD2Q9Y3Q0 740 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 U3KQV3 271 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 ZNF292O60281 2723 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 CER1O95813 267 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 RPN2P04844 631 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 ERGP11308 486 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 PRPS2P11908 318 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 NBL1P41271 181 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 HHEXQ03014 270 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 TAP2Q03519 686 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 DPY19L1Q2PZI1 675 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 OGFOD3Q6PK18 319 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 C10orf111Q8N326 155 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 SDR16C5Q8N3Y7 309 aa21.68■■□□□ 1.06
USF3-203ENST00000491165 ASCC3Q8N3C0 2202 aaKnown RBP21.68■■□□□ 1.06
USF3-203ENST00000491165 RP1P56715 2156 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 J3QRK9 145 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 BCKDKO14874 412 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 VIPP01282 170 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 GSNP06396 782 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 CCDC159P0C7I6 412 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 OCM2P0CE71 109 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 OCMP0CE72 109 aaPredicted RBP21.67■■□□□ 1.06
USF3-203ENST00000491165 ITGAMP11215 1152 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 SLC6A12P48065 614 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 ABHD18Q0P651 414 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 NR1D2Q14995 579 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 TTC23LQ6PF05 361 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 SLC35F3Q8IY50 421 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 SELENOMQ8WWX9 145 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 INPP5KQ9BT40 448 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 POT1Q9NUX5 634 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 ENPP5Q9UJA9 477 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 HEBP2Q9Y5Z4 205 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 COLEC10Q9Y6Z7 277 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 ZFHX2Q9C0A1 2572 aaPredicted RBP21.67■■□□□ 1.06
USF3-203ENST00000491165 OR5K4A6NMS3 321 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 CASC3O15234 703 aaKnown RBP21.67■■□□□ 1.06
USF3-203ENST00000491165 EPORP19235 508 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 NAE1Q13564 534 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 CDKL4Q5MAI5 379 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 SHQ1Q6PI26 577 aaKnown RBP21.67■■□□□ 1.06
USF3-203ENST00000491165 SLC16A12Q6ZSM3 486 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 ANKRD46Q86W74 232 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 TRIM48Q8IWZ4 208 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 SYTL1Q8IYJ3 562 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 ZNF566Q969W8 418 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 OR4K3Q96R72 315 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 ELOVL6Q9H5J4 265 aa21.67■■□□□ 1.06
USF3-203ENST00000491165 SLC22A14Q9Y267 594 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms