RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CUL1Q13616 776 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 BHLHB9Q6PI77 547 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 PPP1R21Q6ZMI0 780 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 ZNF550Q7Z398 422 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 BTLAQ7Z6A9 289 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 CTAGE6Q86UF2 777 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 TMEM132CQ8N3T6 1108 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 OTUD6BQ8N6M0 293 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 PRELID2Q8N945 189 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 TC2NQ8N9U0 490 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 PPHLN1Q8NEY8 458 aaKnown RBP12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 NT5CQ8TCD5 201 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 PTPMT1Q8WUK0 201 aaPredicted RBP12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 LPGAT1Q92604 370 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 ANKRD9Q96BM1 317 aaPredicted RBP12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 UGT2B28Q9BY64 529 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 KLHL31Q9H511 634 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 CLK4Q9HAZ1 481 aaKnown RBP12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 ZNHIT6Q9NWK9 470 aaKnown RBP12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 CRYL1Q9Y2S2 319 aa12.5□□□□□ -0.41
EXOSC3-207ENST00000490516 GFYI3L273 518 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 NRDCO43847 1150 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 RCBTB2O95199 551 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 SERPINC1P01008 464 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 C1QAP02745 245 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 IFNA16P05015 189 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 ACVR1BP36896 505 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 DIO3P55073 304 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 CCZ1BP86790 482 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 CCZ1P86791 482 aaPredicted RBP12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 OCRLQ01968 901 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 RCAN2Q14206 197 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 ELAVL1Q15717 326 aaKnown RBP12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 PHKG1Q16816 387 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 PIGGQ5H8A4 983 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 MBOAT1Q6ZNC8 495 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 C22orf34Q6ZV56 151 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 MPP5Q8N3R9 675 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 GIMAP7Q8NHV1 300 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 SLC22A8Q8TCC7 542 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 ANGPTL4Q9BY76 406 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 PCBD2Q9H0N5 130 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 SPNS1Q9H2V7 528 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 PIGMQ9H3S5 423 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 PACSIN3Q9UKS6 424 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 TENM1Q9UKZ4 2725 aa12.49□□□□□ -0.41
EXOSC3-207ENST00000490516 GOLGA8KD6RF30 607 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 GOLGA8TH3BQL2 631 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 ZBTB14O43829 449 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 AKR1B10O60218 316 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 PLAUP00749 431 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 SMIM10L1P0DMW3 83 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 CCKARP32238 428 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 THBS2P35442 1172 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 IDUAP35475 653 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 CLCN7P51798 805 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 HSD17B7P56937 341 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 RUNX2Q13950 521 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 AADACL2Q6P093 401 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 LYPD8Q6UX82 237 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 CYHR1Q6ZMK1 362 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 UBE2R2Q712K3 238 aaPredicted RBP12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 FAM47BQ8NA70 645 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 MORN4Q8NDC4 146 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 FAM13CQ8NE31 585 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 OR10G3Q8NGC4 313 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 OR8K1Q8NGG5 319 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 OR5L2Q8NGL0 311 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 OR8K3Q8NH51 312 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 PEX13Q92968 403 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 SMIM10Q96HG1 83 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 FAM111AQ96PZ2 611 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 KCNK17Q96T54 332 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 TUBA1CQ9BQE3 449 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 DOHHQ9BU89 302 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 OSBPL8Q9BZF1 889 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 AICDAQ9GZX7 198 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 LAMP3Q9UQV4 416 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 CHCHD2Q9Y6H1 151 aaPredicted RBP12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 PKD1L1Q8TDX9 2849 aa12.48□□□□□ -0.41
EXOSC3-207ENST00000490516 TRBC2A0A5B9 178 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 E5RI56 91 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 H3BMM5 538 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 TMCC2O75069 709 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 ADAM11O75078 769 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 TRIM3O75382 744 aaPredicted RBP12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 SMNDC1O75940 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 ESR1P03372 595 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 HPNP05981 417 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 CYP4B1P13584 511 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 NPPBP16860 134 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 CFPP27918 469 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 CD79BP40259 229 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 CDK9P50750 372 aaKnown RBP12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 CCR8P51685 355 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 COPS2P61201 443 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 CRADDP78560 199 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 NAE1Q13564 534 aa12.47□□□□□ -0.41
EXOSC3-207ENST00000490516 MPEG1Q2M385 716 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms