RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 USP12O75317 370 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TRIM3O75382 744 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ULK1O75385 1050 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SEC22BO75396 215 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC22A3O75751 556 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 UGT2B17O75795 530 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ANXA9O76027 345 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TPPPO94811 219 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SEMA3DO95025 777 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 IL33O95760 270 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ANGPTL1O95841 491 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 GOT2P00505 430 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 HRGP04196 525 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ALPPP05187 535 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 KRT8P05787 483 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 LPLP06858 475 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 HMBSP08397 361 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SERPINF2P08697 491 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 LINC00271P0C7V0 271 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 IRF1P10914 325 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ACADMP11310 421 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 MTHFD2P13995 350 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 HGFP14210 728 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ITGA2P17301 1181 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ENPP1P22413 925 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 FDXRP22570 491 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 CTSSP25774 331 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 HOXC13P31276 330 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 RRM2P31350 389 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 HTR7P34969 479 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 CTNNB1P35222 781 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ADRA1BP35368 520 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 AVPR1AP37288 418 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 MTHFRP42898 656 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 MAPK9P45984 424 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 GNPDA1P46926 289 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 NDUFV1P49821 464 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 NKX2-5P52952 324 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 AP2S1P53680 142 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 UGT2B15P54855 530 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 KCNK10P57789 538 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ERVK-8P63133 956 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 CTAG1AP78358 180 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 BNC1Q01954 994 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ACVR1Q04771 509 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 CHRNB3Q05901 458 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 DMPKQ09013 629 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 FCHO2Q0JRZ9 810 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TRAF3Q13114 568 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PLD1Q13393 1074 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TNK1Q13470 666 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 GRB7Q14451 532 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ODF1Q14990 250 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 KIAA0040Q15053 153 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SHHQ15465 462 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 MAPK11Q15759 364 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 IMPG1Q17R60 797 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 KIF19Q2TAC6 998 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SMU1Q2TAY7 513 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 DCAF4L1Q3SXM0 396 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ZFP69Q49AA0 526 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 FBXO43Q4G163 708 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 CT83Q5H943 113 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PAGE3Q5JUK9 113 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 COLEC12Q5KU26 742 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 RBM20Q5T481 1227 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 RSBN1Q5VWQ0 802 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TMEM236Q5W0B7 351 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 AFMIDQ63HM1 303 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 CLEC6AQ6EIG7 209 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 LAIR1Q6GTX8 287 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 FAHD1Q6P587 224 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SHQ1Q6PI26 577 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 CCBE1Q6UXH8 406 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 RANBP10Q6VN20 620 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 IDO2Q6ZQW0 420 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 Q6ZVL8 140 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 RFPL4BQ6ZWI9 263 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 Q7L0L9 218 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PID1Q7Z2X4 250 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PAGE2Q7Z2X7 111 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC46A3Q7Z3Q1 461 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SNX20Q7Z614 316 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 UBE2Q1Q7Z7E8 422 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 GPR149Q86SP6 731 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ISCA2Q86U28 154 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 RALGPS2Q86X27 583 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM131BQ86XD5 332 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 HIPK1Q86Z02 1210 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 DENND6AQ8IWF6 608 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SCN4BQ8IWT1 228 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC22A15Q8IZD6 547 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 OR8H2Q8N162 312 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PYROXD2Q8N2H3 581 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM109AQ8N4B1 249 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PARP16Q8N5Y8 322 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 LRRC52Q8N7C0 313 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM86B1Q8N7N1 296 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 DNAAF3Q8N9W5 541 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms